Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 2.2e-71 272.3 152 100.0
EL10Ac1g00075 Beta vulgaris HOM05D007935 ORTHO05D007393 1.6e-16 90.1 136 43.4
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 1.3e-15 87.0 141 41.8
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 3.4e-11 72.4 122 39.3
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 4.4e-11 72.0 142 37.3
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.3e-10 70.5 147 37.4
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 2.9e-10 69.3 143 35.0
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 1.4e-09 67.0 113 42.5
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 2.4e-09 66.2 137 38.0
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 3.2e-09 65.9 136 37.5
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 5.4e-09 65.1 118 40.7
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 5.4e-09 65.1 128 35.2
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 2.0e-08 63.2 141 37.6
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 2.7e-08 62.8 139 37.4
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 3.5e-08 62.4 96 49.0
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 5.9e-08 61.6 91 44.0
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 1.0e-07 60.8 89 42.7
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.3e-07 60.5 95 46.3
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 3.0e-07 59.3 89 41.6
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 3.9e-07 58.9 141 38.3
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 5.0e-07 58.5 103 44.7
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 6.6e-07 58.2 106 39.6
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 6.6e-07 58.2 148 31.1
AL106U10030 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 1.1e-06 57.4 93 46.2
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 1.1e-06 57.4 93 46.2
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 1.1e-06 57.4 138 35.5
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.9e-06 56.6 132 37.9
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 1.9e-06 56.6 154 35.7
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 3.3e-06 55.8 142 36.6
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 3.3e-06 55.8 128 38.3
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 4.3e-06 55.5 123 38.2
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 7.3e-06 54.7 128 39.1
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 9.5e-06 54.3 95 41.1
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 9.5e-06 54.3 91 40.7
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 9.5e-06 54.3 95 42.1
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 9.5e-06 54.3 109 36.7


User provided reference genes

Program Settings