Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 7.1e-48 193.7 108 100.0
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 8.5e-33 143.7 97 73.2
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.6e-31 139.4 97 79.4
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.6e-31 139.4 98 81.6
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 7.9e-31 137.1 89 77.5
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.0e-30 136.7 89 75.3
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.0e-30 136.7 89 75.3
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 3.9e-30 134.8 89 73.0
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 5.1e-30 134.4 89 73.0
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 6.7e-30 134.0 96 76.0
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 8.8e-30 133.7 90 84.4
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 8.8e-30 133.7 89 75.3
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 8.8e-30 133.7 89 75.3
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 8.8e-30 133.7 89 77.5
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 1.1e-29 133.3 89 85.4
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.1e-29 133.3 100 71.0
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.5e-29 132.9 89 76.4
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.9e-29 132.5 101 75.2
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.9e-29 132.5 101 75.2
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 4.3e-29 131.3 89 75.3
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 4.3e-29 131.3 89 70.8
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 9.7e-29 130.2 95 72.6
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 9.7e-29 130.2 92 76.1
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.7e-28 129.4 91 78.0
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 2.8e-28 128.6 89 71.9
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 4.8e-28 127.9 90 75.6
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 4.8e-28 127.9 89 74.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 6.3e-28 127.5 97 68.0
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 6.3e-28 127.5 98 71.4
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 6.3e-28 127.5 89 83.1
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 6.3e-28 127.5 89 83.1
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 8.2e-28 127.1 89 73.0
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 8.2e-28 127.1 84 78.6
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.1e-27 126.7 89 74.2
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 1.4e-27 126.3 99 71.7
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.8e-27 125.9 101 75.2
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.8e-27 125.9 83 80.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.8e-27 125.9 102 74.5
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.8e-27 125.9 89 73.0
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.4e-27 125.6 90 74.4
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 3.1e-27 125.2 89 82.0
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.1e-27 125.2 83 75.9
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 3.1e-27 125.2 90 74.4
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.1e-27 124.8 90 71.1
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 5.3e-27 124.4 98 69.4
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 5.3e-27 124.4 83 73.5
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 5.3e-27 124.4 98 81.6
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.9e-27 124.0 100 65.0
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 6.9e-27 124.0 89 82.0
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 6.9e-27 124.0 89 73.0
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 9.1e-27 123.6 90 74.4
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 9.1e-27 123.6 90 77.8
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 9.1e-27 123.6 104 71.2
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 9.1e-27 123.6 98 74.5
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.2e-26 123.2 102 71.6
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.2e-26 123.2 102 71.6
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.5e-26 122.9 103 70.9
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.5e-26 122.9 100 77.0
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.5e-26 122.9 83 73.5
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.5e-26 122.9 83 73.5
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.6e-26 122.1 89 69.7
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 2.6e-26 122.1 90 74.4
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.6e-26 122.1 92 69.6
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.6e-26 122.1 98 72.4
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.4e-26 121.7 90 67.8
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 3.4e-26 121.7 89 77.5
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 4.5e-26 121.3 89 77.5
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.5e-26 121.3 90 76.7
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 5.9e-26 120.9 100 75.0
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 7.7e-26 120.6 90 76.7
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.3e-25 119.8 91 70.3
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.7e-25 119.4 83 73.5
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.2e-25 119.0 91 73.6
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 2.9e-25 118.6 89 77.5
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 2.9e-25 118.6 82 81.7
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 5.0e-25 117.9 100 69.0
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.0e-25 117.9 91 75.8
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 5.0e-25 117.9 93 77.4
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 6.5e-25 117.5 84 75.0
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 6.5e-25 117.5 103 68.9
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 8.5e-25 117.1 83 83.1
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 8.5e-25 117.1 89 71.9
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.1e-24 116.7 98 67.3
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 2.5e-24 115.5 82 74.4
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 2.5e-24 115.5 98 73.5
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.2e-24 115.2 86 76.7
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 4.2e-24 114.8 86 75.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 7.2e-24 114.0 90 77.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 7.2e-24 114.0 90 77.8
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 7.2e-24 114.0 89 69.7
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.6e-23 112.8 96 70.8
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.6e-23 112.8 96 70.8
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 7.9e-23 110.5 105 65.7
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.4e-22 109.8 92 75.0
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.8e-22 109.4 82 76.8
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 3.9e-22 108.2 101 68.3
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 3.9e-22 108.2 78 83.3
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 3.3e-21 105.1 103 66.0
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 4.4e-21 104.8 98 70.4
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 7.4e-21 104.0 96 67.7
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 2.2e-20 102.4 103 64.1
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.8e-20 102.1 97 67.0
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 6.3e-20 100.9 89 66.3
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 9.1e-19 97.1 97 61.9
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.5e-18 96.3 61 70.5
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 3.4e-18 95.1 96 49.0
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 3.4e-18 95.1 61 72.1
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 4.2e-16 88.2 93 63.4
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 4.7e-15 84.7 86 67.4
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.8e-14 82.8 91 62.6
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 9.7e-13 77.0 59 79.7
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.7e-12 75.1 91 48.4
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 2.0e-10 69.3 71 69.0
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 4.5e-10 68.2 57 64.9
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 7.7e-10 67.4 62 45.2
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 1.0e-09 67.0 51 68.6
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 2.5e-08 62.4 59 61.0
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 5.5e-08 61.2 90 52.2
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 7.2e-08 60.8 52 80.8
MCO12G274 Micromonas commoda HOM05D006768 ORTHO05D008436 1.0e-06 57.0 100 45.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 2.3e-06 55.8 67 43.3


User provided reference genes

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