Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 2.3e-66 255.4 126 100.0
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.9e-52 209.1 125 80.0
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 4.3e-52 208.0 123 80.5
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 5.6e-52 207.6 126 80.2
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 7.3e-52 207.2 125 80.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 9.5e-52 206.8 125 78.4
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.6e-51 206.1 125 79.2
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 1.6e-51 206.1 123 79.7
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 2.1e-51 205.7 125 78.4
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 2.8e-51 205.3 125 78.4
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 3.6e-51 204.9 125 78.4
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 3.6e-51 204.9 125 78.4
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 3.6e-51 204.9 125 78.4
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 4.7e-51 204.5 125 78.4
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 8.0e-51 203.8 126 77.0
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 8.0e-51 203.8 123 78.9
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 1.0e-50 203.4 124 77.4
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.0e-50 203.4 126 77.0
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.4e-50 203.0 123 78.0
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.4e-50 203.0 125 76.8
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.4e-50 203.0 125 77.6
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.4e-50 203.0 126 77.0
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 1.4e-50 203.0 125 77.6
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.4e-50 203.0 123 78.0
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.4e-50 203.0 125 77.6
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 1.8e-50 202.6 125 76.8
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 1.8e-50 202.6 126 77.0
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 2.3e-50 202.2 126 77.0
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 2.3e-50 202.2 125 78.4
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.3e-50 202.2 120 79.2
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 2.3e-50 202.2 126 77.0
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 3.1e-50 201.8 123 78.0
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 3.1e-50 201.8 123 78.0
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 3.1e-50 201.8 125 76.8
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.1e-50 201.8 125 76.8
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 4.0e-50 201.4 125 76.8
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 4.0e-50 201.4 125 76.0
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 4.0e-50 201.4 125 76.8
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 5.2e-50 201.1 125 76.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 5.2e-50 201.1 125 77.6
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 6.8e-50 200.7 125 76.0
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 6.8e-50 200.7 125 76.0
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 6.8e-50 200.7 125 76.0
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 6.8e-50 200.7 125 76.0
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 6.8e-50 200.7 120 78.3
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 6.8e-50 200.7 120 78.3
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 8.9e-50 200.3 125 75.2
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 8.9e-50 200.3 124 77.4
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 8.9e-50 200.3 123 76.4
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 8.9e-50 200.3 125 78.4
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 1.2e-49 199.9 124 78.2
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.2e-49 199.9 124 75.8
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.2e-49 199.9 124 75.8
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.2e-49 199.9 125 76.8
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.5e-49 199.5 123 77.2
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 1.5e-49 199.5 124 78.2
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 1.5e-49 199.5 125 79.2
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.5e-49 199.5 120 77.5
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 2.0e-49 199.1 124 75.8
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 2.0e-49 199.1 124 75.8
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 2.0e-49 199.1 124 75.8
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 2.0e-49 199.1 124 75.0
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 2.0e-49 199.1 124 75.8
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 2.6e-49 198.7 125 74.4
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 3.4e-49 198.4 124 75.8
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 3.4e-49 198.4 125 78.4
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 4.4e-49 198.0 125 76.0
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 4.4e-49 198.0 124 76.6
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 4.4e-49 198.0 124 75.0
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.4e-49 198.0 125 74.4
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 5.8e-49 197.6 124 75.8
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 5.8e-49 197.6 125 74.4
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 5.8e-49 197.6 124 75.0
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.8e-49 197.6 125 74.4
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 5.8e-49 197.6 125 77.6
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 5.8e-49 197.6 124 75.8
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 7.5e-49 197.2 124 75.0
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 7.5e-49 197.2 124 78.2
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 7.5e-49 197.2 123 74.8
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 7.5e-49 197.2 125 74.4
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 7.5e-49 197.2 124 75.8
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.8e-49 196.8 125 74.4
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 9.8e-49 196.8 124 78.2
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 9.8e-49 196.8 124 75.0
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 73.6
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 73.6
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 77.6
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 77.6
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 77.6
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 77.6
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 77.6
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 1.3e-48 196.4 124 75.0
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 1.3e-48 196.4 124 74.2
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.7e-48 196.1 125 72.8
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.7e-48 196.1 125 75.2
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.7e-48 196.1 126 74.6
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 2.9e-48 195.3 123 78.9
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.9e-48 195.3 119 76.5
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 3.7e-48 194.9 126 77.8
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 4.9e-48 194.5 125 73.6
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 4.9e-48 194.5 126 73.8
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 4.9e-48 194.5 125 73.6
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 6.4e-48 194.1 124 72.6
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 6.4e-48 194.1 125 72.8
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 8.3e-48 193.7 124 74.2
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.1e-47 193.4 124 74.2
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.1e-47 193.4 124 72.6
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.9e-47 192.6 123 74.0
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 1.9e-47 192.6 120 75.0
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.2e-47 191.8 124 74.2
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 4.1e-47 191.4 124 73.4
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 4.1e-47 191.4 124 72.6
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 4.1e-47 191.4 120 74.2
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 4.1e-47 191.4 120 73.3
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 5.4e-47 191.0 124 72.6
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 1.2e-46 189.9 126 72.2
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.6e-46 188.0 115 76.5
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 6.0e-46 187.6 124 70.2
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 6.0e-46 187.6 125 72.8
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 2.3e-45 185.7 126 69.8
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 5.0e-45 184.5 115 74.8
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 6.6e-45 184.1 112 78.6
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 3.6e-43 178.3 112 75.0
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 1.1e-42 176.8 112 74.1
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 1.4e-42 176.4 110 77.3
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 1.8e-42 176.0 107 78.5
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.3e-42 175.6 126 69.0
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 3.1e-42 175.3 103 82.5
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.0e-42 174.9 125 69.6
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.0e-41 172.6 107 76.6
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 5.8e-41 171.0 118 69.5
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 7.5e-41 170.6 125 64.0
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 9.8e-41 170.2 115 73.0
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.2e-40 169.1 125 66.4
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 4.9e-40 167.9 131 64.1
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.9e-39 166.0 109 75.2
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 2.3e-37 159.1 101 76.2
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 3.0e-37 158.7 120 64.2
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.5e-36 155.6 119 62.2
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 5.6e-36 154.5 91 79.1
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 7.3e-36 154.1 125 60.0
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.2e-35 153.3 98 74.5
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.6e-35 152.9 98 74.5
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 3.6e-35 151.8 132 61.4
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 4.0e-34 148.3 102 73.5
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 4.0e-34 148.3 87 78.2
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.2e-32 142.5 120 56.7
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 8.4e-32 140.6 125 56.8
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.9e-31 139.4 98 70.4
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.4e-31 139.0 102 66.7
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 8.6e-29 130.6 121 52.1
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.3e-28 128.6 69 85.5
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.2e-22 110.2 57 86.0
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.5e-22 108.6 109 52.3
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.5e-20 103.2 78 56.4
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 4.3e-20 101.7 124 44.4
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 5.6e-20 101.3 72 58.3
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.8e-18 96.3 107 45.8
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.3e-18 94.7 110 48.2
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 6.4e-16 87.8 62 69.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.5e-14 82.0 43 86.0
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 1.7e-08 63.2 35 82.9
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.4e-07 59.3 32 81.2
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 5.5e-07 58.2 35 74.3


User provided reference genes

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