Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 3.7e-76 288.1 143 100.0
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.9e-48 196.1 140 70.7
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 9.4e-48 193.7 134 67.2
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 2.1e-47 192.6 128 72.7
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 2.1e-47 192.6 132 70.5
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.1e-47 192.6 132 70.5
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.1e-47 192.6 114 79.8
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 2.1e-47 192.6 139 69.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.1e-47 192.6 141 69.5
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 3.6e-47 191.8 140 68.6
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 3.6e-47 191.8 134 67.2
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 6.1e-47 191.0 114 80.7
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 6.1e-47 191.0 136 69.9
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 8.0e-47 190.7 138 68.1
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 8.0e-47 190.7 134 66.4
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 1.0e-46 190.3 138 67.4
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.4e-46 189.9 140 68.6
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 2.3e-46 189.1 127 71.7
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 2.3e-46 189.1 138 66.7
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.2e-45 186.8 134 69.4
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.0e-45 186.0 137 67.2
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.0e-45 186.0 108 80.6
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 2.0e-45 186.0 138 66.7
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.0e-45 186.0 135 68.1
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 3.4e-45 185.3 111 74.8
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 3.4e-45 185.3 111 77.5
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 4.4e-45 184.9 138 66.7
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 7.5e-45 184.1 138 65.2
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 9.8e-45 183.7 133 65.4
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 2.2e-44 182.6 114 74.6
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 2.2e-44 182.6 132 66.7
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.2e-44 182.6 134 66.4
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 2.2e-44 182.6 138 63.0
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.8e-44 182.2 107 77.6
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 4.8e-44 181.4 138 63.0
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 6.3e-44 181.0 141 64.5
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 8.3e-44 180.6 138 68.1
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 8.3e-44 180.6 111 75.7
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 8.3e-44 180.6 111 74.8
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 8.3e-44 180.6 138 65.2
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 8.3e-44 180.6 135 64.4
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.4e-43 179.9 114 75.4
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.4e-43 179.9 136 66.9
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.8e-43 179.5 136 65.4
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.8e-43 179.5 135 63.7
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 2.4e-43 179.1 136 66.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 2.4e-43 179.1 143 64.3
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 3.1e-43 178.7 129 67.4
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 4.1e-43 178.3 111 75.7
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 5.4e-43 177.9 133 66.2
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 5.4e-43 177.9 109 72.5
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 5.4e-43 177.9 143 64.3
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 7.0e-43 177.6 108 77.8
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 7.0e-43 177.6 143 61.5
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.2e-42 176.8 136 66.2
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.2e-42 176.8 138 65.2
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.6e-42 176.4 132 64.4
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.6e-42 176.4 132 64.4
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.6e-42 176.4 104 77.9
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 2.0e-42 176.0 127 69.3
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 2.0e-42 176.0 132 65.2
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 2.0e-42 176.0 107 75.7
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.5e-42 175.3 107 77.6
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.5e-42 175.3 107 77.6
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 3.5e-42 175.3 138 63.0
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 4.5e-42 174.9 132 64.4
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 5.9e-42 174.5 138 60.9
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 5.9e-42 174.5 108 72.2
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 7.7e-42 174.1 132 63.6
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 2.3e-41 172.6 110 72.7
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 2.9e-41 172.2 132 62.9
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 3.8e-41 171.8 136 64.0
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 3.8e-41 171.8 140 60.7
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.1e-40 170.2 132 63.6
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.1e-40 170.2 136 61.0
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.9e-40 169.5 135 61.5
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 2.5e-40 169.1 134 61.2
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 3.3e-40 168.7 135 63.0
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 4.2e-40 168.3 142 60.6
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 4.2e-40 168.3 134 63.4
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 5.5e-40 167.9 135 63.0
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 9.5e-40 167.2 109 70.6
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 9.5e-40 167.2 107 70.1
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.6e-39 166.4 145 60.0
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 2.1e-39 166.0 107 72.9
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.7e-39 164.9 135 62.2
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 8.0e-39 164.1 108 70.4
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.8e-38 162.9 127 60.6
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.8e-38 162.9 132 59.8
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.3e-38 162.5 109 70.6
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 4.0e-38 161.8 183 51.9
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 5.2e-38 161.4 109 69.7
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 7.5e-37 157.5 147 55.8
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 3.7e-36 155.2 122 63.9
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 8.3e-36 154.1 141 57.4
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 8.3e-36 154.1 205 42.9
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.4e-35 152.5 87 80.5
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 4.1e-35 151.8 109 64.2
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.3e-33 146.0 108 58.3
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 5.0e-33 144.8 109 65.1
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 8.6e-33 144.1 90 73.3
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.1e-31 139.4 87 73.6
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.4e-30 136.7 87 72.4
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 5.2e-30 134.8 116 62.1
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.5e-29 133.3 140 52.1
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 7.5e-29 131.0 85 72.9
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.8e-27 126.3 112 52.7
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 4.1e-27 125.2 90 70.0
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.6e-26 123.2 83 71.1
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 6.0e-26 121.3 83 69.9
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 6.2e-23 111.3 70 74.3
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 7.5e-21 104.4 66 72.7
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.3e-20 103.6 134 43.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 9.2e-19 97.4 62 69.4


User provided reference genes

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