Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0004920 Simmondsia chinensis HOM05D006022 ORTHO05D007649 2.6e-223 778.5 408 100.0
Hund14211 Selenicereus undatus HOM05D006022 ORTHO05D007649 2.2e-94 350.1 413 53.8
EL10Ac5g12933 Beta vulgaris HOM05D006022 ORTHO05D007649 7.2e-93 345.1 411 51.8
Dinv38822 Davidia involucrata HOM05D006022 ORTHO05D007406 2.4e-88 330.1 402 51.5
GSVIVG01019556001 Vitis vinifera HOM05D006022 ORTHO05D007649 2.9e-86 323.2 404 50.2
Haze_09085 Corylus avellana HOM05D006022 ORTHO05D007649 4.0e-83 312.8 425 48.7
TAR375G1078 Trochodendron aralioides HOM05D006022 ORTHO05D007649 5.2e-83 312.4 430 47.4
Cfa011987 Carpinus fangiana HOM05D006022 ORTHO05D007649 6.8e-83 312.0 421 48.7
Ciclev10018527m.g Citrus clementina HOM05D006022 ORTHO05D007649 6.8e-83 312.0 418 48.1
AUR62010858 Chenopodium quinoa HOM05D006022 ORTHO05D007649 4.4e-82 309.3 425 46.8
Hma1.2p1_0359F.1_g135140 Hydrangea macrophylla HOM05D006022 ORTHO05D007649 1.3e-81 307.8 408 49.5
CiPaw.12G081600 Carya illinoinensis HOM05D006022 ORTHO05D007649 2.2e-81 307.0 420 47.1
Actinidia22171 Actinidia chinensis HOM05D006022 ORTHO05D007649 6.3e-81 305.4 428 47.0
PGR042G3794 Punica granatum HOM05D006022 ORTHO05D007649 1.1e-80 304.7 410 47.6
vmacro11345 Vaccinium macrocarpon HOM05D006022 ORTHO05D007649 2.4e-80 303.5 416 47.6
QL02p030100 Quercus lobata HOM05D006022 ORTHO05D007649 7.0e-80 302.0 432 46.8
Nn1g00246 Nelumbo nucifera HOM05D006022 ORTHO05D007649 9.2e-80 301.6 435 47.1
Prupe.5G122300 Prunus persica HOM05D006022 ORTHO05D007649 4.5e-79 299.3 438 46.1
COL.COLO4_10720 Corchorus olitorius HOM05D006022 ORTHO05D007649 5.9e-79 298.9 429 47.6
FAN18G3678 Fragaria x ananassa HOM05D006022 ORTHO05D007649 2.3e-78 297.0 432 47.9
FvH4_5g04850 Fragaria vesca HOM05D006022 ORTHO05D007649 2.9e-78 296.6 432 47.7
CANSAT21G0687 Cannabis sativa HOM05D006022 ORTHO05D007649 8.6e-78 295.0 406 47.3
MSTRG.1801 Avicennia marina HOM05D006022 ORTHO05D007649 1.1e-77 294.7 421 46.8
FAN18G0793 Fragaria x ananassa HOM05D006022 ORTHO05D007649 2.5e-77 293.5 431 47.3
FAN04G2854 Fragaria x ananassa HOM05D006022 ORTHO05D007649 4.3e-77 292.7 431 47.1
Rhsim02G0245100 Rhododendron simsii HOM05D006022 ORTHO05D007649 4.3e-77 292.7 416 46.6
RcHm_v2.0_Chr7g0194241 Rosa chinensis HOM05D006022 ORTHO05D007649 5.6e-77 292.4 436 47.2
Thecc.03G300300 Theobroma cacao HOM05D006022 ORTHO05D007649 7.3e-77 292.0 434 46.5
Potri.001G089900 Populus trichocarpa HOM05D006022 ORTHO05D007649 9.5e-77 291.6 421 46.3
Gohir.D08G125400 Gossypium hirsutum HOM05D006022 ORTHO05D007649 1.6e-76 290.8 411 46.7
Glyma.05G217800 Glycine max HOM05D006022 ORTHO05D007649 2.8e-76 290.0 427 45.2
Gorai.004G132300 Gossypium raimondii HOM05D006022 ORTHO05D007649 2.8e-76 290.0 411 46.5
MD14G1130300 Malus domestica HOM05D006022 ORTHO05D007649 2.8e-76 290.0 437 46.9
Ca_17472_v3 Cicer arietinum L. HOM05D006022 ORTHO05D007649 3.6e-76 289.7 434 45.9
Duzib084G0652 Durio zibethinus HOM05D006022 ORTHO05D007649 8.0e-76 288.5 432 45.8
Sabra01G0066300 Salix brachista HOM05D006022 ORTHO05D007649 8.0e-76 288.5 415 45.8
Lj4g0024036 Lotus japonicus HOM05D006022 ORTHO05D007649 1.0e-75 288.1 412 45.6
Psat7g023280 Pisum sativum HOM05D006022 ORTHO05D007649 1.0e-75 288.1 414 47.1
Glyma.08G023800 Glycine max HOM05D006022 ORTHO05D007649 2.3e-75 287.0 416 46.4
Gohir.A08G112400 Gossypium hirsutum HOM05D006022 ORTHO05D007649 2.3e-75 287.0 415 46.0
RhsimUnG0007600 Rhododendron simsii HOM05D006022 ORTHO05D007649 2.3e-75 287.0 416 46.6
TWI81G0375 Tripterygium wilfordii HOM05D006022 ORTHO05D007649 1.5e-74 284.3 423 46.1
Cpa.g.sc79.13 Carica papaya HOM05D006022 ORTHO05D007649 3.4e-74 283.1 431 45.7
Ah.07g197550 Amaranthus hybridus HOM05D006022 ORTHO05D007649 7.5e-74 282.0 408 45.6
Cc08_g16230 Coffea canephora HOM05D006022 ORTHO05D007649 7.5e-74 282.0 423 45.9
DCAR_029909 Daucus carota HOM05D006022 ORTHO05D007649 7.5e-74 282.0 426 45.8
Duzib205G1781 Durio zibethinus HOM05D006022 ORTHO05D007649 2.2e-73 280.4 431 45.7
Phvul.002G299600 Phaseolus vulgaris HOM05D006022 ORTHO05D007649 1.4e-72 277.7 424 45.3
MD06G1109300 Malus domestica HOM05D006022 ORTHO05D007649 2.4e-72 276.9 433 45.7
Peaxi162Scf00117g00919 Petunia axillaris HOM05D006022 ORTHO05D007649 5.4e-72 275.8 417 46.8
TPR.G3389 Trifolium pratense HOM05D006022 ORTHO05D007649 9.2e-72 275.0 435 44.4
arahy.Tifrunner.gnm1.ann1.DK6PZW Arachis hypogaea HOM05D006022 ORTHO05D007649 2.0e-71 273.9 404 45.8
Manes.01G050200 Manihot esculenta HOM05D006022 ORTHO05D007649 2.7e-71 273.5 417 45.8
VMungo0251G1998 Vigna mungo HOM05D006022 ORTHO05D007649 3.5e-71 273.1 415 46.0
arahy.Tifrunner.gnm1.ann1.MN1JRI Arachis hypogaea HOM05D006022 ORTHO05D007649 4.6e-71 272.7 404 45.8
Lj2A165T43 Lonicera japonica HOM05D006022 ORTHO05D007649 7.8e-71 271.9 414 45.7
Lalb_Chr05g0224031 Lupinus albus HOM05D006022 ORTHO05D007649 1.7e-70 270.8 417 42.9
Nitab4.5_0004515g0030 Nicotiana tabacum HOM05D006022 ORTHO05D007649 1.7e-70 270.8 422 45.5
CAN.G390.10 Capsicum annuum HOM05D006022 ORTHO05D007649 2.3e-70 270.4 417 46.3
ECA233G0648 Erigeron canadensis HOM05D006022 ORTHO05D007649 3.3e-69 266.5 423 44.2
SGA_v2.0_scaffold111G31401 Striga asiatica HOM05D006022 ORTHO05D007649 7.3e-69 265.4 420 42.9
Migut.E01259 Erythranthe guttata HOM05D006022 ORTHO05D007649 1.6e-68 264.2 405 44.0
Medtr8g099585 Medicago truncatula HOM05D006022 ORTHO05D007649 2.8e-68 263.5 435 42.8
Aqoxy5G04291 Aquilegia oxysepala HOM05D006022 ORTHO05D007649 3.6e-68 263.1 428 44.9
MELO3C005765.2 Cucumis melo HOM05D006022 ORTHO05D007649 4.7e-68 262.7 421 43.5
ClCG01G001730 Citrullus lanatus HOM05D006022 ORTHO05D007649 4.0e-67 259.6 419 43.7
AUR62019856 Chenopodium quinoa HOM05D006022 ORTHO05D007649 5.2e-67 259.2 434 43.8
CsaV3_5G001870 Cucumis sativus L. HOM05D006022 ORTHO05D007649 8.9e-67 258.5 425 42.4
MBI07_g39841_MAGBIO Magnolia biondii HOM05D006022 ORTHO05D007649 8.9e-67 258.5 455 43.7
PSO170G1024 Papaver somniferum HOM05D006022 ORTHO05D007649 1.2e-66 258.1 428 42.8
HanXRQChr10g0316931 Helianthus annuus HOM05D006022 ORTHO05D007649 9.8e-66 255.0 410 44.4
Sopen12g024380 Solanum pennellii HOM05D006022 ORTHO05D007649 9.8e-66 255.0 411 44.0
Sed0008879 Sechium edule HOM05D006022 ORTHO05D007649 1.3e-65 254.6 412 43.7
Sp6g06550 Schrenkiella parvula HOM05D006022 ORTHO05D007649 8.3e-65 251.9 406 43.3
THA.LOC104807002 Tarenaya hassleriana HOM05D006022 ORTHO05D007649 1.3e-62 244.6 408 43.1
Solyc12g055910.3 Solanum lycopersicum HOM05D006022 ORTHO05D007649 2.3e-62 243.8 411 43.1
Oeu009975.1 Olea europaea HOM05D006022 ORTHO05D007649 7.3e-61 238.8 389 42.9
AT4G10930 Arabidopsis thaliana HOM05D006022 ORTHO05D007649 1.2e-60 238.0 417 41.5
Lsat_1_v5_gn_6_8380 Lactuca sativa HOM05D006022 ORTHO05D007649 1.2e-60 238.0 396 42.2
Eucgr.E00880 Eucalyptus grandis HOM05D006022 ORTHO05D007649 3.6e-60 236.5 417 40.8
Thhalv10028398m.g Eutrema salsugineum HOM05D006022 ORTHO05D007649 8.1e-60 235.3 408 41.2
AL6G45030 Arabidopsis lyrata HOM05D006022 ORTHO05D007649 3.1e-59 233.4 411 41.6
CARHR255670 Cardamine hirsuta HOM05D006022 ORTHO05D007649 5.2e-59 232.6 415 41.0
A03p29210 Brassica napus HOM05D006022 ORTHO05D007649 1.2e-58 231.5 405 41.5
BraA03t12116Z Brassica rapa HOM05D006022 ORTHO05D007649 1.2e-58 231.5 405 41.5
Nitab4.5_0004010g0010 Nicotiana tabacum HOM05D006022 ORTHO05D007649 1.5e-58 231.1 417 41.2
BcaB01g02727 Brassica carinata HOM05D006022 ORTHO05D007649 9.9e-58 228.4 415 40.0
BcaC01g04650 Brassica carinata HOM05D006022 ORTHO05D007649 4.9e-57 226.1 414 39.1
C03p35290 Brassica napus HOM05D006022 ORTHO05D007649 4.9e-57 226.1 412 40.0
BolC3t15840H Brassica oleracea HOM05D006022 ORTHO05D007649 4.9e-57 226.1 414 39.1
Carub.0006s2968 Capsella rubella HOM05D006022 ORTHO05D007649 1.2e-55 221.5 439 38.0
ATR0602G083 Amborella trichopoda HOM05D006022 ORTHO05D007649 9.6e-53 211.8 436 39.4
Atru.chr9.1963 Acer truncatum HOM05D006022 ORTHO05D007649 1.8e-51 207.6 343 45.2
unitig_26.g9566 Utricularia gibba HOM05D006022 ORTHO05D007649 1.3e-49 201.4 407 39.1
Os12g0209700 Oryza sativa ssp. japonica HOM05D006022 ORTHO05D007649 4.5e-34 149.8 466 32.8
CSS0021468 Camellia sinensis var. sinensis HOM05D006022 ORTHO05D007649 1.8e-30 137.9 170 51.2
Zm00001eb209080 Zea mays HOM05D006022 ORTHO05D007649 3.3e-21 107.1 432 29.6
SEGI_16880 Sequoiadendron giganteum HOM05D006022 ORTHO05D007649 6.5e-17 92.8 335 31.9
Mapoly0002s0107 Marchantia polymorpha HOM05D006022 ORTHO05D007649 1.1e-16 92.0 484 28.7
HPP92_009829 Vanilla planifolia HOM05D006022 ORTHO05D007649 6.1e-15 86.3 405 28.6
AagrBONN_evm.TU.Sc2ySwM_228.3550 Anthoceros agrestis HOM05D006022 ORTHO05D007649 1.1e-13 82.0 66 54.5
SMO364G0157 Selaginella moellendorffii HOM05D003349 ORTHO05D003898 1.3e-12 78.6 445 27.6
Pp3c6_15100 Physcomitrium patens HOM05D006022 ORTHO05D007649 8.2e-12 75.9 508 26.4
Actinidia11683 Actinidia chinensis HOM05D006022 ORTHO05D007649 1.3e-09 68.6 90 47.8
CBR_g31499 Chara braunii HOM05D006022 ORTHO05D007649 6.5e-09 66.2 100 37.0
TWI60G1065 Tripterygium wilfordii HOM05D006022 ORTHO05D007649 3.0e-06 57.4 129 38.0


User provided reference genes

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