Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0004480 Simmondsia chinensis HOM05D014970 ORTHO05D000385 5.3e-125 451.1 232 100.0
Sc11g0005200 Simmondsia chinensis HOM05D014970 ORTHO05D019369 5.4e-101 371.3 317 66.6
Sc10g0006960 Simmondsia chinensis HOM05D014970 ORTHO05D019369 1.2e-39 167.5 99 91.9
Sc03g0005700 Simmondsia chinensis HOM05D014970 ORTHO05D019369 1.5e-39 167.2 105 86.7
Sc13g0007670 Simmondsia chinensis HOM05D014970 ORTHO05D019369 2.9e-38 162.9 99 88.9
Sc08g0004860 Simmondsia chinensis HOM05D014970 ORTHO05D019369 5.1e-35 152.1 105 80.0
Sc21g0002930 Simmondsia chinensis HOM05D014970 ORTHO05D019369 2.1e-33 146.7 101 79.2
Sc13g0007660 Simmondsia chinensis HOM05D014970 ORTHO05D019369 1.2e-28 131.0 81 84.0
Sc11g0003660 Simmondsia chinensis HOM05D014970 ORTHO05D019369 1.1e-21 107.8 98 64.3
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 1.8e-19 100.5 114 46.5
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.9e-19 99.4 211 34.1
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.5e-18 96.7 115 40.0
AUR62031149 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-18 96.3 167 40.7
AUR62041732 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-18 96.3 206 35.0
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 7.4e-18 95.1 226 31.4
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.3e-17 94.4 160 37.5
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-17 92.4 129 39.5
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.4e-16 90.1 81 49.4
Hund03863 Selenicereus undatus HOM05D009682 ORTHO05D000385 6.9e-16 88.6 216 32.4
AUR62026239 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.1e-16 88.2 148 37.8
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.2e-15 87.8 121 40.5
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 1.3e-14 84.3 112 43.8
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-13 80.9 84 50.0
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-13 80.9 90 47.8
AUR62005789 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-13 80.5 84 50.0
AUR62037118 Chenopodium quinoa HOM05D010065 ORTHO05D000385 1.9e-13 80.5 168 32.1
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.2e-13 78.6 84 47.6
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.4e-13 78.2 93 47.3
AUR62037264 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.2e-12 77.8 109 40.4
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 1.2e-12 77.8 111 39.6
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.1e-12 77.0 114 41.2
HanXRQChr02g0040071 Helianthus annuus HOM05D004615 ORTHO05D000385 2.7e-12 76.6 78 50.0
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.9e-12 75.1 114 38.6
AUR62035483 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.9e-12 75.1 260 28.1
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-11 74.3 107 39.3
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-11 74.3 100 43.0
AUR62019804 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-11 73.6 125 34.4
AUR62027608 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.0e-11 73.2 92 41.3
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 3.0e-11 73.2 111 36.0
PGSC0003DMG400046273 Solanum tuberosum HOM05D008041 ORTHO05D000385 3.9e-11 72.8 105 36.2
AUR62019515 Chenopodium quinoa HOM05D010065 ORTHO05D000385 5.1e-11 72.4 132 35.6
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 6.7e-11 72.0 84 44.0
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 6.7e-11 72.0 84 44.0
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 6.7e-11 72.0 84 44.0
AUR62037964 Chenopodium quinoa HOM05D014060 ORTHO05D000385 6.7e-11 72.0 100 39.0
AUR62040424 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.8e-11 71.6 78 48.7
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 71.6 105 37.1
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 71.6 105 37.1
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 71.6 105 37.1
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 71.6 105 37.1
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 71.6 105 37.1
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 71.6 105 37.1
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 1.1e-10 71.2 77 48.1
AUR62010806 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.1e-10 71.2 137 31.4
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 1.1e-10 71.2 139 32.4
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 1.1e-10 71.2 121 31.4
Sopen08g013620 Solanum pennellii HOM05D008041 ORTHO05D000385 2.0e-10 70.5 130 32.3
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 2.6e-10 70.1 127 37.0
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 2.6e-10 70.1 127 37.0
AUR62027663 Chenopodium quinoa HOM05D014060 ORTHO05D000385 2.6e-10 70.1 92 40.2
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 2.6e-10 70.1 105 36.2
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 2.6e-10 70.1 105 36.2
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.3e-10 69.7 104 39.4
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.3e-10 69.7 89 40.4
SGA_v2.0_scaffold279G46788 Striga asiatica HOM05D004615 ORTHO05D000385 3.3e-10 69.7 97 38.1
AUR62040771 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.4e-10 69.3 81 44.4
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 4.4e-10 69.3 84 39.3
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.4e-10 69.3 105 36.2
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 4.4e-10 69.3 94 37.2
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 5.7e-10 68.9 84 44.0
AUR62013324 Chenopodium quinoa HOM05D010065 ORTHO05D000385 5.7e-10 68.9 78 41.0
AUR62040355 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.7e-10 68.9 124 33.1
Hund03726 Selenicereus undatus HOM05D004615 ORTHO05D000385 7.4e-10 68.6 69 39.1
Sc11g0005940 Simmondsia chinensis HOM05D014970 ORTHO05D388061 7.4e-10 68.6 45 75.6
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 9.7e-10 68.2 81 40.7
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-09 67.8 127 36.2
Solyc08g016567.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.3e-09 67.8 67 47.8
Sc18g0005230 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.7e-09 67.4 174 35.6
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.7e-09 67.4 105 35.2
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.2e-09 67.0 139 28.1
SGA_v2.0_scaffold11G05529 Striga asiatica HOM05D004615 ORTHO05D000385 2.2e-09 67.0 120 33.3
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-09 66.6 113 34.5
AUR62034499 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.8e-09 66.6 87 42.5
Solyc10g018713.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.8e-09 66.6 70 45.7
AUR62030145 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.7e-09 66.2 107 37.4
Solyc01g034040.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.7e-09 66.2 105 35.2
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 4.8e-09 65.9 232 27.6
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 4.8e-09 65.9 78 39.7
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 6.3e-09 65.5 264 28.4
AUR62024348 Chenopodium quinoa HOM05D014060 ORTHO05D000385 8.2e-09 65.1 73 39.7
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 8.2e-09 65.1 105 34.3
AUR62029474 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-08 64.3 69 47.8
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-08 64.3 69 49.3
Solyc05g032825.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.4e-08 64.3 86 36.0
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 1.4e-08 64.3 86 34.9
AUR62025845 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.8e-08 63.9 247 27.1
AUR62004861 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.4e-08 63.5 73 39.7
AUR62042814 Chenopodium quinoa HOM05D010065 ORTHO05D000385 2.4e-08 63.5 200 28.0
AUR62042476 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.3e-08 62.4 80 41.2
Sopen10g008660 Solanum pennellii HOM05D008041 ORTHO05D000385 5.3e-08 62.4 184 27.7
SGA_v2.0_scaffold528G52732 Striga asiatica HOM05D004615 ORTHO05D000385 5.3e-08 62.4 136 30.1
AUR62042260 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.5e-07 60.8 102 38.2
AUR62041034 Chenopodium quinoa HOM05D000107 ORTHO05D000385 2.6e-07 60.1 190 28.9
AUR62030337 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.5e-07 59.3 51 56.9
Sopen04g010730 Solanum pennellii HOM05D008041 ORTHO05D000385 4.5e-07 59.3 74 39.2
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 4.5e-07 59.3 81 35.8
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 7.7e-07 58.5 99 30.3
Sc03g0005370 Simmondsia chinensis HOM05D009343 ORTHO05D000385 7.7e-07 58.5 77 42.9
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.0e-06 58.2 159 27.0
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 1.0e-06 58.2 87 34.5
Sopen09g018580 Solanum pennellii HOM05D004615 ORTHO05D000385 1.0e-06 58.2 65 35.4
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 2.2e-06 57.0 108 32.4
SGA_v2.0_scaffold251G45054 Striga asiatica HOM05D004615 ORTHO05D000385 2.2e-06 57.0 105 33.3
Psat7g143560 Pisum sativum HOM05D008859 ORTHO05D000385 2.9e-06 56.6 62 38.7
Hund12189 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.9e-06 56.6 201 26.9
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 2.9e-06 56.6 116 28.4
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 8.5e-06 55.1 89 34.8
Psat5g082920 Pisum sativum HOM05D008859 ORTHO05D000385 8.5e-06 55.1 87 33.3
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 8.5e-06 55.1 87 33.3
Sc06g0003990 Simmondsia chinensis HOM05D004615 ORTHO05D000385 8.5e-06 55.1 69 39.1
Sopen02g007300 Solanum pennellii HOM05D002469 ORTHO05D000385 8.5e-06 55.1 139 25.9
PGSC0003DMG400034515 Solanum tuberosum HOM05D008041 ORTHO05D000385 8.5e-06 55.1 95 32.6


User provided reference genes

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