Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-119 432.6 214 100.0
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-50 203.0 179 59.2
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.8e-49 197.6 156 65.4
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.3e-48 194.9 177 52.5
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.1e-39 165.6 170 55.9
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-38 162.2 170 51.8
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.6e-37 158.3 155 57.4
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-35 153.7 174 45.4
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-35 153.3 136 58.1
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-34 150.6 130 60.8
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.2e-34 148.7 139 54.0
Sc07g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-32 141.7 94 69.1
Sc02g0004930 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-30 136.3 129 53.5
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.5e-28 127.9 125 50.4
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-27 126.7 93 65.6
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.1e-27 124.8 99 61.6
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.2e-26 122.1 93 62.4
Sc06g0004280 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.2e-26 122.1 125 53.6
Sc10g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-24 117.5 111 50.5
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-23 113.2 103 61.2
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.1e-23 112.5 93 55.9
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.4e-23 112.1 85 67.1
Sc11g0004200 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-22 109.8 108 50.9
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.6e-21 105.1 82 62.2
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.6e-21 105.1 99 52.5
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 2.5e-20 103.2 171 34.5
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-20 103.2 91 53.8
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.3e-20 102.8 91 52.7
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.5e-20 101.3 75 64.0
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-19 100.1 85 57.6
Sc05g0003960 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.8e-19 99.8 98 55.1
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-19 99.4 82 61.0
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-18 97.4 75 64.0
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-18 97.4 77 59.7
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-18 95.9 99 52.5
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.2e-18 95.5 88 53.4
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.2e-18 95.5 81 60.5
Sc05g0004710 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.9e-18 94.7 75 61.3
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-17 94.4 99 52.5
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-17 93.6 83 59.0
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-16 89.7 79 58.2
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-15 87.4 59 71.2
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-15 86.7 97 45.4
Sc11g0003920 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-14 84.3 64 62.5
QL01p013702 Quercus lobata HOM05D009149 ORTHO05D003639 3.5e-14 82.8 171 28.7
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-14 82.8 64 64.1
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-14 82.0 62 66.1
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-13 80.5 73 60.3
Sc02g0004860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-13 80.5 53 71.7
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-13 80.5 66 62.1
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.6e-13 78.2 63 65.1
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 1.6e-11 73.9 164 29.3
Sc12g0008170 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-11 72.0 53 58.5
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-10 70.5 85 47.1
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-10 70.5 73 54.8
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 5.2e-10 68.9 188 27.1
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 8.9e-10 68.2 189 25.9
FvH4_4g18552 Fragaria vesca HOM05D009149 ORTHO05D003639 2.0e-09 67.0 195 26.7
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 2.0e-09 67.0 189 27.0
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-09 66.6 40 65.0
RcHm_v2.0_Chr4g0410321 Rosa chinensis HOM05D009149 ORTHO05D003639 4.4e-09 65.9 188 26.6
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 5.8e-09 65.5 188 25.5
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-09 65.5 55 58.2
RcHm_v2.0_Chr4g0419521 Rosa chinensis HOM05D009149 ORTHO05D003639 7.6e-09 65.1 189 25.4
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-08 64.3 44 68.2
COL.COLO4_35525 Corchorus olitorius HOM05D007843 ORTHO05D003639 1.7e-08 63.9 166 27.1
FvH4_1g29795 Fragaria vesca HOM05D009149 ORTHO05D003639 1.7e-08 63.9 189 27.0
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 2.2e-08 63.5 188 25.0
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 2.9e-08 63.2 171 28.7
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-07 61.2 35 77.1
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-07 60.1 50 60.0
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 4.2e-07 59.3 175 28.0
Oeu021571.1 Olea europaea HOM05D007843 ORTHO05D003639 1.2e-06 57.8 174 28.2


User provided reference genes

Program Settings