Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0002670 Simmondsia chinensis HOM05D000003 ORTHO05D002259 6.4e-79 297.4 151 100.0
Sc04g0007350 Simmondsia chinensis HOM05D000003 ORTHO05D002259 5.5e-14 81.6 95 43.2
Sc10g0007930 Simmondsia chinensis HOM05D000003 ORTHO05D002259 2.7e-13 79.3 87 44.8
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.0e-12 75.9 87 42.5
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.7e-12 74.7 84 42.9
Hma1.2p1_0546F.1_g176250 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 3.3e-11 72.4 90 44.4
Hma1.2p1_0024F.1_g016160 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 4.4e-11 72.0 117 33.3
Atru.chr13.1770 Acer truncatum HOM05D000003 ORTHO05D002259 3.1e-09 65.9 90 37.8
TWI34G1270 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 4.1e-09 65.5 93 43.0
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-09 64.7 114 32.5
Sc08g0005900 Simmondsia chinensis HOM05D039915 ORTHO05D002259 7.0e-09 64.7 55 50.9
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 9.1e-09 64.3 117 35.0
Atru.chr5.1380 Acer truncatum HOM05D000003 ORTHO05D002259 9.1e-09 64.3 112 35.7
Atru.chr3.2994 Acer truncatum HOM05D000003 ORTHO05D002259 1.2e-08 63.9 118 33.1
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 1.2e-08 63.9 92 35.9
EL10Ac8g19409 Beta vulgaris HOM05D000003 ORTHO05D002259 2.0e-08 63.2 90 35.6
Atru.chr1.3206 Acer truncatum HOM05D000003 ORTHO05D002259 3.5e-08 62.4 114 31.6
Atru.chr2.283 Acer truncatum HOM05D000003 ORTHO05D002259 4.5e-08 62.0 116 31.0
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-08 62.0 92 37.0
TWI14G0536 Tripterygium wilfordii HOM05D008457 ORTHO05D002259 4.5e-08 62.0 82 41.5
Hma1.2p1_0897F.1_g234290 Hydrangea macrophylla HOM05D000155 ORTHO05D000022 5.9e-08 61.6 86 43.0
Hma1.2p1_1241F.1_g269710 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 7.7e-08 61.2 82 36.6
Atru.chr10.950 Acer truncatum HOM05D000003 ORTHO05D002259 1.3e-07 60.5 88 36.4
Atru.chr6.253 Acer truncatum HOM05D000003 ORTHO05D002259 1.3e-07 60.5 91 35.2
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 1.3e-07 60.5 91 39.6
Atru.chr2.1988 Acer truncatum HOM05D000003 ORTHO05D002259 1.7e-07 60.1 92 35.9
Atru.chr6.103 Acer truncatum HOM05D000003 ORTHO05D002259 2.9e-07 59.3 91 34.1
Atru.chr3.3914 Acer truncatum HOM05D000003 ORTHO05D002259 3.8e-07 58.9 118 31.4
Atru.chr6.600 Acer truncatum HOM05D000003 ORTHO05D002259 3.8e-07 58.9 126 30.2
EL10Ac1g00252 Beta vulgaris HOM05D000003 ORTHO05D002259 5.0e-07 58.5 89 32.6
Hma1.2p1_0731F.1_g209885 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 5.0e-07 58.5 92 38.0
Hma1.2p1_1414F.1_g281865 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 5.0e-07 58.5 92 38.0
Hma1.2p1_2732F.1_g327655 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 5.0e-07 58.5 92 38.0
Hma1.2p1_0585F.1_g183600 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 1.1e-06 57.4 79 39.2
Atru.chr5.2369 Acer truncatum HOM05D000003 ORTHO05D002259 1.9e-06 56.6 118 27.1
Hma1.2p1_0055F.1_g031300 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 1.9e-06 56.6 80 40.0
Atru.chr1.182 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-06 56.2 96 35.4
Atru.chr9.664 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-06 56.2 88 36.4
Atru.chr2.923 Acer truncatum HOM05D000021 ORTHO05D000010 4.2e-06 55.5 116 30.2
Atru.chr7.607 Acer truncatum HOM05D000003 ORTHO05D002259 5.5e-06 55.1 118 30.5
Atru.chr11.1160 Acer truncatum HOM05D000003 ORTHO05D002259 7.2e-06 54.7 92 35.9
Atru.chr1.3979 Acer truncatum HOM05D000003 ORTHO05D002259 9.4e-06 54.3 83 33.7
COL.COLO4_23441 Corchorus olitorius HOM05D000003 ORTHO05D002259 9.4e-06 54.3 82 37.8
COL.COLO4_27741 Corchorus olitorius HOM05D000003 ORTHO05D002259 9.4e-06 54.3 89 36.0


User provided reference genes

Program Settings