Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 0.0e+00 1582.0 793 100.0
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.3e-308 1062.8 792 66.3
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.0e-305 1051.2 793 65.4
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 5.4e-302 1040.8 791 65.4
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 5.9e-301 1037.3 793 64.4
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 7.3e-283 977.2 799 62.6
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 2.4e-278 962.2 798 60.3
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 4.6e-277 958.0 801 59.8
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 7.3e-275 950.7 782 61.8
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 6.2e-274 947.6 789 61.2
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.8e-273 946.0 789 60.3
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 8.9e-273 943.7 797 59.6
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 5.4e-270 934.5 808 60.1
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.1e-269 932.6 787 60.0
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.3e-268 929.1 801 59.2
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 4.3e-267 924.9 794 58.7
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 9.6e-267 923.7 806 58.8
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 2.8e-266 922.2 792 59.0
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 3.6e-266 921.8 794 58.6
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 2.4e-265 919.1 797 58.1
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 3.1e-265 918.7 794 59.1
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.5e-264 916.4 782 59.8
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 5.8e-264 914.4 786 58.9
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 5.8e-264 914.4 792 58.7
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.3e-263 913.3 794 58.4
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 2.9e-263 912.1 790 59.7
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.4e-262 909.8 800 58.4
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 4.2e-262 908.3 805 58.1
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 7.1e-262 907.5 785 58.5
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 3.3e-259 898.7 801 56.8
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 3.3e-259 898.7 783 58.7
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.6e-258 896.3 787 57.7
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 2.0e-256 889.4 794 57.2
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.6e-256 889.0 798 57.6
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 3.4e-256 888.6 851 54.9
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.5e-256 888.3 794 57.7
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 2.2e-255 885.9 808 56.6
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 6.4e-255 884.4 789 56.7
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 8.4e-255 884.0 794 58.9
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 8.4e-255 884.0 790 58.2
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 1.1e-254 883.6 804 56.1
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 1.1e-254 883.6 794 57.6
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 1.4e-254 883.2 850 55.4
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.9e-254 882.9 794 57.6
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.4e-254 882.5 794 57.6
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 5.4e-254 881.3 794 58.1
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 9.3e-254 880.6 804 56.2
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 1.2e-253 880.2 800 57.6
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 2.1e-253 879.4 797 56.6
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 1.1e-251 873.6 796 56.2
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 9.6e-251 870.5 787 57.4
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 2.8e-250 869.0 812 54.8
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 3.7e-250 868.6 815 56.6
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 4.2e-246 855.1 799 54.7
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 8.7e-244 847.4 849 52.4
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 7.4e-243 844.3 809 54.1
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.7e-242 842.0 809 53.6
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 7.6e-240 834.3 788 54.1
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.0e-239 833.9 629 66.5
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 4.6e-237 825.1 798 54.6
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 4.3e-235 818.5 794 53.4
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 1.4e-233 813.5 798 52.9
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 6.9e-233 811.2 807 52.7
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 8.5e-231 804.3 797 54.0
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 2.5e-230 802.7 801 52.8
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 2.5e-230 802.7 795 52.2
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 3.2e-230 802.4 800 53.1
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 3.6e-229 798.9 792 52.1
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 7.9e-229 797.7 806 52.7
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 1.0e-228 797.3 799 52.1
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 8.8e-228 794.3 798 52.3
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.1e-227 793.9 799 52.2
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 2.5e-227 792.7 800 52.4
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 2.2e-226 789.6 798 52.4
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 3.4e-224 782.3 798 53.1
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.0e-223 780.8 764 53.1
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.0e-220 770.8 798 51.9
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 1.4e-220 770.4 798 51.9
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 5.1e-220 768.5 806 50.5
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 6.7e-220 768.1 635 61.3
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.1e-219 767.3 742 54.4
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 9.7e-219 764.2 827 52.8
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 1.4e-214 750.4 800 51.6
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 3.3e-211 739.2 794 51.5
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 4.8e-210 735.3 785 49.0
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 7.7e-208 728.0 794 51.0
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 3.1e-201 706.1 784 48.9
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.4e-193 680.6 809 45.9
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 5.2e-188 662.1 671 52.5
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.2e-187 661.0 788 47.6
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 4.1e-185 652.5 584 56.8
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 1.2e-181 641.0 648 53.5
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.2e-179 634.4 809 44.1
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 7.1e-153 545.4 600 50.2
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 8.4e-146 521.9 796 41.0
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.0e-127 461.8 788 39.1
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 1.3e-122 444.9 793 36.9
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 1.5e-107 394.8 848 34.7
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 5.5e-89 333.2 417 45.1
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 1.6e-88 331.6 247 65.2
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 3.7e-85 320.5 857 30.0
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 1.6e-80 305.1 301 53.2
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.1e-76 290.8 371 47.2
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 4.5e-75 287.0 287 50.9
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 7.7e-75 286.2 287 51.6
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 2.3e-74 284.6 253 58.9
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 5.0e-66 256.9 253 53.4
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.5e-54 218.8 184 62.0
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.3e-49 200.7 145 64.8
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 1.5e-41 175.6 201 45.8
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 1.2e-38 166.0 203 43.3
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-36 158.3 983 22.0
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 7.1e-36 156.8 178 47.8
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.6e-35 155.6 280 37.1
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 1.3e-26 125.9 87 69.0
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 7.9e-19 100.1 243 32.1
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 3.3e-17 94.7 643 21.3
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.8e-15 89.0 114 43.0
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 1.6e-11 75.9 72 45.8
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 4.3e-09 67.8 45 62.2
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 5.7e-09 67.4 50 64.0
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 9.6e-09 66.6 49 63.3


User provided reference genes

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