Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0000880 Simmondsia chinensis HOM05D006208 ORTHO05D007606 4.7e-91 337.8 167 100.0
GSVIVG01029918001 Vitis vinifera HOM05D006208 ORTHO05D007606 2.5e-23 112.8 161 41.6
Peaxi162Scf00146g00097 Petunia axillaris HOM05D006208 ORTHO05D007606 8.0e-22 107.8 157 40.1
Thecc.05G239100 Theobroma cacao HOM05D006208 ORTHO05D007606 1.1e-20 104.0 155 41.9
PGSC0003DMG400008402 Solanum tuberosum HOM05D006208 ORTHO05D007606 5.7e-20 101.7 161 37.3
Sopen10g035070 Solanum pennellii HOM05D006208 ORTHO05D007606 1.3e-19 100.5 161 37.3
Solyc10g085660.3 Solanum lycopersicum HOM05D006208 ORTHO05D007606 1.7e-19 100.1 161 37.3
Nitab4.5_0015172g0010 Nicotiana tabacum HOM05D006208 ORTHO05D007606 2.8e-19 99.4 159 38.4
CAN.G1018.11 Capsicum annuum HOM05D006208 ORTHO05D007606 3.7e-19 99.0 154 39.0
QL07p016540 Quercus lobata HOM05D006208 ORTHO05D007606 1.1e-18 97.4 156 38.5
Lj1A1159G88 Lonicera japonica HOM05D006208 ORTHO05D007606 1.8e-18 96.7 157 38.2
Duzib177G0527 Durio zibethinus HOM05D006208 ORTHO05D007606 2.4e-18 96.3 161 39.1
EL10As12g24012 Beta vulgaris HOM05D006208 ORTHO05D007606 4.1e-18 95.5 158 37.3
FAN18G4346 Fragaria x ananassa HOM05D006208 ORTHO05D007606 4.1e-18 95.5 155 38.1
Nitab4.5_0000381g0210 Nicotiana tabacum HOM05D006208 ORTHO05D007606 4.1e-18 95.5 159 37.7
TWI34G1475 Tripterygium wilfordii HOM05D006208 ORTHO05D007606 4.1e-18 95.5 162 38.3
Lj1g0003173 Lotus japonicus HOM05D006208 ORTHO05D007606 5.3e-18 95.1 76 59.2
FvH4_5g39040 Fragaria vesca HOM05D006208 ORTHO05D007606 7.0e-18 94.7 155 37.4
Peaxi162Scf00146g00107 Petunia axillaris HOM05D006208 ORTHO05D007606 7.0e-18 94.7 156 37.2
Peaxi162Scf62544g00003 Petunia axillaris HOM05D006208 ORTHO05D007606 7.0e-18 94.7 156 37.2
COL.COLO4_08902 Corchorus olitorius HOM05D006208 ORTHO05D007606 9.1e-18 94.4 74 63.5
FvH4_3g02594 Fragaria vesca HOM05D006208 ORTHO05D007606 1.6e-17 93.6 155 36.8
Prupe.7G018500 Prunus persica HOM05D006208 ORTHO05D007606 1.6e-17 93.6 159 36.5
Gohir.A13G096300 Gossypium hirsutum HOM05D006208 ORTHO05D007606 2.0e-17 93.2 156 37.8
MD12G1014000 Malus domestica HOM05D006208 ORTHO05D007606 2.0e-17 93.2 155 37.4
FAN13G0695 Fragaria x ananassa HOM05D006208 ORTHO05D007606 2.6e-17 92.8 156 36.5
Ca_03440_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 3.5e-17 92.4 154 38.3
Ca_08778_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 3.5e-17 92.4 154 38.3
Gorai.013G113800 Gossypium raimondii HOM05D006208 ORTHO05D007606 3.5e-17 92.4 156 37.8
Gohir.D13G101700 Gossypium hirsutum HOM05D006208 ORTHO05D007606 4.5e-17 92.0 156 37.8
Peaxi162Scf00146g00108 Petunia axillaris HOM05D006208 ORTHO05D007606 4.5e-17 92.0 74 58.1
Phvul.001G107700 Phaseolus vulgaris HOM05D006208 ORTHO05D007606 4.5e-17 92.0 109 46.8
Cfa019872 Carpinus fangiana HOM05D006208 ORTHO05D007606 7.7e-17 91.3 154 38.3
Psat3g085200 Pisum sativum HOM05D006208 ORTHO05D007606 7.7e-17 91.3 153 40.5
vmacro07634 Vaccinium macrocarpon HOM05D006208 ORTHO05D007606 7.7e-17 91.3 162 37.7
ClCG04G006060 Citrullus lanatus HOM05D006208 ORTHO05D007606 1.0e-16 90.9 156 36.5
MELO3C019160.2 Cucumis melo HOM05D006208 ORTHO05D007606 1.0e-16 90.9 156 36.5
Ah.12g062010 Amaranthus hybridus HOM05D006208 ORTHO05D007606 1.3e-16 90.5 80 58.8
CANSAT78G0878 Cannabis sativa HOM05D006208 ORTHO05D007606 1.3e-16 90.5 160 37.5
Medtr7g087170 Medicago truncatula HOM05D006208 ORTHO05D007606 1.3e-16 90.5 75 57.3
RcHm_v2.0_Chr3g0495701 Rosa chinensis HOM05D006208 ORTHO05D007606 1.3e-16 90.5 156 35.9
AUR62036506 Chenopodium quinoa HOM05D006208 ORTHO05D007606 1.7e-16 90.1 162 34.6
Lalb_Chr22g0358421 Lupinus albus HOM05D006208 ORTHO05D007606 2.2e-16 89.7 114 45.6
Carub.0001s0806 Capsella rubella HOM05D006208 ORTHO05D007606 2.9e-16 89.4 76 52.6
Glyma.19G119400 Glycine max HOM05D006208 ORTHO05D007606 3.8e-16 89.0 153 36.6
BcaB07g34110 Brassica carinata HOM05D006208 ORTHO05D007606 5.0e-16 88.6 158 37.3
VMungo1383G1214 Vigna mungo HOM05D006208 ORTHO05D007606 5.0e-16 88.6 73 58.9
Manes.08G150900 Manihot esculenta HOM05D006208 ORTHO05D007606 8.5e-16 87.8 124 41.1
FAN04G2426 Fragaria x ananassa HOM05D006208 ORTHO05D007606 1.1e-15 87.4 155 36.8
THA.LOC104798848 Tarenaya hassleriana HOM05D006208 ORTHO05D007606 1.5e-15 87.0 78 56.4
A06p05650 Brassica napus HOM05D000200 ORTHO05D000262 1.9e-15 86.7 158 32.9
BraA06t23774Z Brassica rapa HOM05D000200 ORTHO05D000262 1.9e-15 86.7 158 32.9
AL1G19150 Arabidopsis lyrata HOM05D006208 ORTHO05D007606 4.2e-15 85.5 158 32.9
Rhsim03G0045600 Rhododendron simsii HOM05D006208 ORTHO05D007606 4.2e-15 85.5 165 36.4
AT1G08710 Arabidopsis thaliana HOM05D006208 ORTHO05D007606 5.5e-15 85.1 159 34.0
Ciclev10032470m.g Citrus clementina HOM05D006208 ORTHO05D007606 5.5e-15 85.1 159 34.6
Potri.013G067600 Populus trichocarpa HOM05D006208 ORTHO05D007606 7.2e-15 84.7 53 69.8
arahy.Tifrunner.gnm1.ann1.2NMK5X Arachis hypogaea HOM05D006208 ORTHO05D007606 9.4e-15 84.3 76 56.6
Eucgr.K01547 Eucalyptus grandis HOM05D006208 ORTHO05D007606 1.2e-14 84.0 163 35.0
Hma1.2p1_1127F.1_g259670 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 1.2e-14 84.0 83 53.0
Sp1g07360 Schrenkiella parvula HOM05D006208 ORTHO05D007606 1.2e-14 84.0 76 52.6
arahy.Tifrunner.gnm1.ann1.71CHM8 Arachis hypogaea HOM05D006208 ORTHO05D007606 1.6e-14 83.6 76 55.3
CsaV3_4G029050 Cucumis sativus L. HOM05D006208 ORTHO05D007606 1.6e-14 83.6 75 53.3
Dinv14560 Davidia involucrata HOM05D006208 ORTHO05D007606 2.1e-14 83.2 78 53.8
Migut.B00931 Erythranthe guttata HOM05D006208 ORTHO05D007606 2.1e-14 83.2 152 36.8
SalBow6G5221 Salvia bowleyana HOM05D006208 ORTHO05D007606 2.1e-14 83.2 158 34.2
SGA_v2.0_scaffold66G22407 Striga asiatica HOM05D006208 ORTHO05D007606 2.1e-14 83.2 164 31.1
CARHR008630 Cardamine hirsuta HOM05D006208 ORTHO05D007606 2.7e-14 82.8 135 35.6
Sabra13G0059000 Salix brachista HOM05D006208 ORTHO05D007606 2.7e-14 82.8 77 51.9
C05p06800 Brassica napus HOM05D006208 ORTHO05D007606 3.6e-14 82.4 158 32.9
Haze_20379 Corylus avellana HOM05D006208 ORTHO05D007606 3.6e-14 82.4 53 67.9
Medtr7g087140 Medicago truncatula HOM05D006208 ORTHO05D007606 3.6e-14 82.4 154 37.0
unitig_0.g581 Utricularia gibba HOM05D006208 ORTHO05D007606 4.7e-14 82.0 165 33.9
VMungo1383G2538 Vigna mungo HOM05D006208 ORTHO05D007606 4.7e-14 82.0 73 56.2
Aqoxy6G01592 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 6.1e-14 81.6 157 33.1
Atru.chr2.1570 Acer truncatum HOM05D006208 ORTHO05D007606 8.0e-14 81.3 75 56.0
Thhalv10008513m.g Eutrema salsugineum HOM05D006208 ORTHO05D007606 8.0e-14 81.3 76 51.3
MBI19_g04334_MAGBIO Magnolia biondii HOM05D006208 ORTHO05D007606 8.0e-14 81.3 157 32.5
TPR.G7831 Trifolium pratense HOM05D006208 ORTHO05D007606 8.0e-14 81.3 76 52.6
CiPaw.09G165300 Carya illinoinensis HOM05D006208 ORTHO05D007606 1.0e-13 80.9 75 52.0
Aa31sc449G40 Aethionema arabicum HOM05D006208 ORTHO05D007606 1.8e-13 80.1 76 48.7
ECA232G0512 Erigeron canadensis HOM05D006208 ORTHO05D007606 1.8e-13 80.1 144 37.5
Nn8g39480 Nelumbo nucifera HOM05D006208 ORTHO05D007606 1.8e-13 80.1 154 32.5
TPR.G7822 Trifolium pratense HOM05D006208 ORTHO05D007606 1.8e-13 80.1 70 57.1
Hund10725 Selenicereus undatus HOM05D006208 ORTHO05D007606 3.0e-13 79.3 88 50.0
BcaC05g24798 Brassica carinata HOM05D006208 ORTHO05D007606 6.7e-13 78.2 138 34.1
BolC5t29439H Brassica oleracea HOM05D006208 ORTHO05D007606 6.7e-13 78.2 138 34.1
SHI14857 Sapria himalayana HOM05D006208 ORTHO05D007606 6.7e-13 78.2 52 67.3
TPR.G15311 Trifolium pratense HOM05D006208 ORTHO05D007606 1.2e-12 77.4 76 51.3
Cc03_g15330 Coffea canephora HOM05D006208 ORTHO05D007606 1.5e-12 77.0 172 32.0
Oeu029768.1 Olea europaea HOM05D006208 ORTHO05D007606 2.0e-12 76.6 77 46.8
DCAR_020701 Daucus carota HOM05D006208 ORTHO05D007606 5.7e-12 75.1 76 51.3
HPP92_022884 Vanilla planifolia HOM05D006208 ORTHO05D007606 7.5e-12 74.7 73 46.6
MSTRG.19726 Avicennia marina HOM05D006208 ORTHO05D007606 9.7e-12 74.3 159 34.0
Oeu029769.2 Olea europaea HOM05D006208 ORTHO05D007606 9.7e-12 74.3 74 47.3
Aqoxy3G03625 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 1.1e-10 70.9 78 47.4
ATR0068G109 Amborella trichopoda HOM05D006208 ORTHO05D007606 1.4e-10 70.5 73 47.9
Zm00001eb149890 Zea mays HOM05D006208 ORTHO05D007606 1.4e-10 70.5 56 57.1
Aqoxy3G03662 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 1.8e-10 70.1 81 44.4
Os01g0814700 Oryza sativa ssp. japonica HOM05D006208 ORTHO05D007606 4.1e-10 68.9 85 45.9
Sed0009124 Sechium edule HOM05D006208 ORTHO05D007606 3.5e-09 65.9 74 48.6
Oeu032547.1 Olea europaea HOM05D006208 ORTHO05D007606 7.7e-09 64.7 53 50.9
Hma1.2p1_0776F.1_g216610 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 2.2e-08 63.2 61 52.5
SEGI_30866 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 3.8e-08 62.4 80 40.0
SEGI_27241 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 1.1e-07 60.8 71 40.8
SMO351G0165 Selaginella moellendorffii HOM05D006208 ORTHO05D007606 1.6e-06 57.0 111 27.0


User provided reference genes

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