Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 2.4e-56 221.9 106 100.0
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 5.7e-34 147.5 86 77.9
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.3e-33 146.4 88 75.0
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.3e-33 146.4 88 75.0
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.3e-33 146.4 84 77.4
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 3.7e-33 144.8 83 78.3
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.7e-33 144.8 83 78.3
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.7e-33 144.8 86 77.9
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 6.4e-33 144.1 84 75.0
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 6.4e-33 144.1 84 75.0
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-32 143.3 86 74.4
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 5.4e-32 141.0 84 75.0
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 5.4e-32 141.0 84 75.0
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 7.0e-32 140.6 83 75.9
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 7.0e-32 140.6 86 73.3
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 9.2e-32 140.2 83 77.1
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 1.2e-31 139.8 83 74.7
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.2e-31 139.8 85 76.5
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 1.2e-31 139.8 83 77.1
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.6e-31 139.4 83 74.7
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.7e-31 138.7 83 75.9
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 3.5e-31 138.3 83 75.9
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 3.5e-31 138.3 80 82.5
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 4.6e-31 137.9 86 73.3
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 5.9e-31 137.5 86 72.1
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 7.8e-31 137.1 83 71.1
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 7.8e-31 137.1 83 71.1
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 7.8e-31 137.1 86 69.8
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 1.0e-30 136.7 87 72.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 1.0e-30 136.7 86 70.9
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 2.3e-30 135.6 83 73.5
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 2.3e-30 135.6 86 72.1
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.3e-30 135.6 88 70.5
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 3.9e-30 134.8 83 73.5
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 3.9e-30 134.8 83 73.5
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 5.0e-30 134.4 86 72.1
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.9e-29 132.5 83 71.1
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.9e-29 132.5 84 71.4
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 2.5e-29 132.1 83 77.1
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 2.5e-29 132.1 83 71.1
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 4.3e-29 131.3 83 69.9
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 7.3e-29 130.6 83 69.9
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 7.3e-29 130.6 83 69.9
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 7.3e-29 130.6 83 72.3
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 7.3e-29 130.6 86 66.3
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 9.5e-29 130.2 87 69.0
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 9.5e-29 130.2 83 74.7
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.6e-28 129.4 88 68.2
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 2.1e-28 129.0 83 66.3
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 3.6e-28 128.3 79 74.7
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.7e-28 127.9 86 70.9
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 8.0e-28 127.1 83 73.5
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.0e-27 126.7 83 69.9
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 3.1e-27 125.2 81 67.9
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 3.1e-27 125.2 83 71.1
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 6.8e-27 124.0 84 75.0
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 8.9e-27 123.6 86 64.0
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.5e-26 122.9 78 74.4
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.0e-26 122.5 86 62.8
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 3.4e-26 121.7 86 65.1
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.3e-25 119.8 85 74.1
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 1.3e-25 119.8 85 74.1
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 1.7e-25 119.4 84 72.6
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 1.7e-25 119.4 85 74.1
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.7e-25 119.4 83 69.9
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 2.9e-25 118.6 84 64.3
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 8.3e-25 117.1 127 48.8
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 8.3e-25 117.1 85 63.5
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 8.3e-25 117.1 90 60.0
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 1.4e-24 116.3 85 72.9
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.4e-24 116.3 84 66.7
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.6e-23 112.8 66 75.8
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 1.6e-23 112.8 65 78.5
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 2.0e-23 112.5 72 69.4
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 4.6e-23 111.3 63 79.4
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 7.8e-23 110.5 123 49.6
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 2.3e-22 109.0 83 57.8
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 3.9e-22 108.2 68 72.1
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.1e-21 106.7 83 69.9
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.1e-21 106.7 83 69.9
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.5e-21 106.3 66 72.7
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.9e-21 105.9 67 76.1
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.3e-21 104.8 89 60.7
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 7.3e-21 104.0 84 57.1
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 9.5e-21 103.6 66 71.2
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.2e-20 103.2 111 49.5
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.8e-20 102.1 83 56.6
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 6.2e-20 100.9 69 66.7
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.1e-19 98.6 85 57.6
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.3e-17 93.2 68 72.1
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.3e-17 93.2 59 74.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 2.2e-17 92.4 49 81.6
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 8.3e-17 90.5 83 56.6
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 3.2e-16 88.6 194 31.4
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.3e-14 83.2 87 43.7
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 2.5e-13 79.0 84 56.0
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.2e-12 76.6 86 40.7
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.8e-12 75.5 46 78.3
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.1e-11 73.6 50 70.0
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 1.8e-11 72.8 49 61.2
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.1e-11 72.0 68 54.4
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 3.1e-11 72.0 106 37.7
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 1.2e-10 70.1 36 83.3
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.5e-10 69.7 86 50.0
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 2.6e-10 68.9 50 70.0
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 5.8e-10 67.8 42 73.8
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 1.3e-09 66.6 80 42.5
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.7e-09 66.2 66 42.4
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 3.8e-09 65.1 84 47.6
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 1.4e-08 63.2 34 79.4
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 2.1e-07 59.3 85 34.1
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 4.6e-07 58.2 34 70.6
Haze_26654 Corylus avellana HOM05D002397 ORTHO05D002667 1.7e-06 56.2 73 37.0
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 6.6e-06 54.3 32 71.9


User provided reference genes

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