Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc22g0000740 Simmondsia chinensis HOM05D007929 ORTHO05D008690 1.1e-301 1039.3 537 100.0
Hund14599 Selenicereus undatus HOM05D007929 ORTHO05D008690 1.9e-72 277.7 657 36.1
AUR62007484 Chenopodium quinoa HOM05D007929 ORTHO05D008690 1.6e-68 264.6 678 35.7
EL10Ac5g13019 Beta vulgaris HOM05D007929 ORTHO05D008690 3.9e-62 243.4 640 35.5
Dinv21608 Davidia involucrata HOM05D007929 ORTHO05D008690 6.4e-57 226.1 716 30.9
AUR62039940 Chenopodium quinoa HOM05D007929 ORTHO05D008690 2.7e-55 220.7 668 32.0
QL12p013187 Quercus lobata HOM05D007929 ORTHO05D008690 3.0e-54 217.2 696 31.9
Dinv39112 Davidia involucrata HOM05D007929 ORTHO05D008690 7.4e-53 212.6 700 32.7
Ah.12g056550 Amaranthus hybridus HOM05D007929 ORTHO05D008690 5.3e-51 206.5 629 32.3
Duzib084G1023 Durio zibethinus HOM05D007929 ORTHO05D008690 2.1e-47 194.5 713 27.5
Thecc.03G256000 Theobroma cacao HOM05D007929 ORTHO05D008690 4.6e-47 193.4 697 29.7
Duzib205G1039 Durio zibethinus HOM05D007929 ORTHO05D008690 3.9e-46 190.3 712 28.2
COL.COLO4_37202 Corchorus olitorius HOM05D007929 ORTHO05D008690 5.1e-46 189.9 693 29.1
Ciclev10019204m.g Citrus clementina HOM05D007929 ORTHO05D008690 6.9e-43 179.5 646 29.9
Potri.003G112000 Populus trichocarpa HOM05D007929 ORTHO05D008690 2.0e-42 177.9 715 27.4
Gohir.D08G189300 Gossypium hirsutum HOM05D007929 ORTHO05D008690 3.8e-41 173.7 719 27.7
Gorai.008G237100 Gossypium raimondii HOM05D007929 ORTHO05D008690 5.0e-41 173.3 708 27.8
Gorai.004G199400 Gossypium raimondii HOM05D007929 ORTHO05D008690 2.5e-40 171.0 715 27.4
Gohir.A12G219000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 3.2e-40 170.6 714 28.3
vmacro14098 Vaccinium macrocarpon HOM05D007929 ORTHO05D008690 5.5e-40 169.9 684 27.3
Prupe.5G074300 Prunus persica HOM05D007929 ORTHO05D008690 7.2e-40 169.5 673 29.0
Gohir.A08G171000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 2.7e-39 167.5 717 26.9
Manes.02G036501 Manihot esculenta HOM05D007929 ORTHO05D008690 2.7e-39 167.5 641 30.3
Cfa021312 Carpinus fangiana HOM05D007929 ORTHO05D008690 1.0e-38 165.6 700 30.0
Duzib068G0525 Durio zibethinus HOM05D007929 ORTHO05D008690 1.3e-38 165.2 709 28.5
Actinidia27458 Actinidia chinensis HOM05D007929 ORTHO05D008690 3.0e-38 164.1 694 28.4
Manes.01G077200 Manihot esculenta HOM05D007929 ORTHO05D008690 1.3e-36 158.7 689 27.7
Actinidia05192 Actinidia chinensis HOM05D007929 ORTHO05D008690 1.6e-36 158.3 675 28.7
Sabra01G0093400 Salix brachista HOM05D007929 ORTHO05D008690 3.1e-35 154.1 715 26.7
CiPaw.12G107500 Carya illinoinensis HOM05D007929 ORTHO05D008690 4.1e-35 153.7 691 28.4
ClCG01G003880 Citrullus lanatus HOM05D007929 ORTHO05D008690 1.5e-34 151.8 597 28.0
CsaV3_5G004010 Cucumis sativus L. HOM05D007929 ORTHO05D008690 1.0e-33 149.1 630 26.3
Sabra03G0077700 Salix brachista HOM05D007929 ORTHO05D008690 1.0e-33 149.1 714 25.9
Gohir.D12G221300 Gossypium hirsutum HOM05D007929 ORTHO05D008690 1.7e-33 148.3 687 26.8
TWI60G0818 Tripterygium wilfordii HOM05D007929 ORTHO05D008690 1.7e-33 148.3 682 27.3
FAN18G3609 Fragaria x ananassa HOM05D007929 ORTHO05D008690 8.5e-33 146.0 627 27.1
MELO3C005557.2 Cucumis melo HOM05D007929 ORTHO05D008690 1.1e-32 145.6 643 28.1
FAN08G2103 Fragaria x ananassa HOM05D007929 ORTHO05D008690 1.1e-32 145.6 612 28.4
Hma1.2p1_1720F.1_g299295 Hydrangea macrophylla HOM05D007929 ORTHO05D008690 1.9e-32 144.8 235 41.3
Hma1.2p1_1720F.1_g299300 Hydrangea macrophylla HOM05D007929 ORTHO05D008690 1.9e-32 144.8 235 41.3
Sed0000260 Sechium edule HOM05D007929 ORTHO05D008690 1.9e-32 144.8 619 25.7
FvH4_5g00200 Fragaria vesca HOM05D007929 ORTHO05D008690 2.5e-32 144.4 627 27.3
RcHm_v2.0_Chr7g0202661 Rosa chinensis HOM05D007929 ORTHO05D008690 4.2e-32 143.7 603 27.7
MD06G1062900 Malus domestica HOM05D007929 ORTHO05D008690 1.2e-31 142.1 650 25.2
MD04G1085400 Malus domestica HOM05D007929 ORTHO05D008690 1.6e-31 141.7 645 28.1
Nn1g01073 Nelumbo nucifera HOM05D007929 ORTHO05D008690 1.6e-31 141.7 765 25.9
Potri.001G121200 Populus trichocarpa HOM05D007929 ORTHO05D008690 2.1e-31 141.4 715 25.3
FAN13G1817 Fragaria x ananassa HOM05D007929 ORTHO05D008690 3.9e-30 137.1 632 27.5
Rhsim07G0105500 Rhododendron simsii HOM05D007929 ORTHO05D008690 6.7e-30 136.3 232 37.9
Nn6g34027 Nelumbo nucifera HOM05D007929 ORTHO05D008690 1.7e-28 131.7 751 26.0
Haze_07866 Corylus avellana HOM05D007929 ORTHO05D008690 6.3e-28 129.8 673 27.9
Oeu029333.1 Olea europaea HOM05D007929 ORTHO05D008690 1.4e-27 128.6 603 28.7
Sopen08g027490 Solanum pennellii HOM05D007929 ORTHO05D008690 1.8e-27 128.3 210 39.0
DCAR_027794 Daucus carota HOM05D007929 ORTHO05D008690 2.6e-26 124.4 329 32.5
Solyc08g079030.4 Solanum lycopersicum HOM05D007929 ORTHO05D008690 1.7e-25 121.7 211 37.9
TAR374G1634 Trochodendron aralioides HOM05D007929 ORTHO05D008690 1.7e-25 121.7 280 33.2
GSVIVG01004789001 Vitis vinifera HOM05D007929 ORTHO05D008690 1.7e-25 121.7 596 28.2
Peaxi162Scf00002g00920 Petunia axillaris HOM05D007929 ORTHO05D008690 3.8e-25 120.6 232 36.6
FAN04G0968 Fragaria x ananassa HOM05D007929 ORTHO05D008690 5.0e-25 120.2 230 36.1
Eucgr.E00452 Eucalyptus grandis HOM05D007929 ORTHO05D008690 6.5e-25 119.8 302 35.4
Nitab4.5_0009716g0010 Nicotiana tabacum HOM05D007929 ORTHO05D008690 1.1e-24 119.0 221 34.8
MSTRG.25535 Avicennia marina HOM05D007929 ORTHO05D008690 1.4e-24 118.6 679 25.9
CAN.G1217.13 Capsicum annuum HOM05D007929 ORTHO05D008690 1.6e-23 115.2 208 36.1
PGSC0003DMG400004743 Solanum tuberosum HOM05D007929 ORTHO05D008690 1.6e-23 115.2 208 35.6
Nitab4.5_0000993g0050 Nicotiana tabacum HOM05D007929 ORTHO05D008690 7.9e-23 112.8 292 33.2
Carub.0002s0245 Capsella rubella HOM05D009328 ORTHO05D008690 3.3e-21 107.5 179 41.9
AT1G62530 Arabidopsis thaliana HOM05D009328 ORTHO05D008690 5.7e-21 106.7 132 50.8
MBI04_g37591_MAGBIO Magnolia biondii HOM05D007929 ORTHO05D008690 8.2e-20 102.8 279 32.3
AL2G13340 Arabidopsis lyrata HOM05D009328 ORTHO05D008690 1.1e-19 102.4 149 45.0
THA.LOC104823548 Tarenaya hassleriana HOM05D009328 ORTHO05D008690 9.1e-19 99.4 221 36.7
Lsat_1_v5_gn_6_1860 Lactuca sativa HOM05D007929 ORTHO05D008690 2.6e-18 97.8 159 44.0
THA.LOC104818527 Tarenaya hassleriana HOM05D009328 ORTHO05D008690 3.5e-18 97.4 161 43.5
BraA08t35218Z Brassica rapa HOM05D009328 ORTHO05D008690 5.9e-18 96.7 156 41.7
BcaB03g13206 Brassica carinata HOM05D009328 ORTHO05D008690 2.2e-17 94.7 189 39.7
BcaB02g06408 Brassica carinata HOM05D009328 ORTHO05D008690 1.5e-16 92.0 151 43.0
Thhalv10007497m.g Eutrema salsugineum HOM05D009328 ORTHO05D008690 1.9e-16 91.7 177 40.1
arahy.Tifrunner.gnm1.ann1.S80PKI Arachis hypogaea HOM05D007929 ORTHO05D008690 2.5e-16 91.3 162 41.4
Aa31LG1G2600 Aethionema arabicum HOM05D009328 ORTHO05D008690 9.4e-16 89.4 112 46.4
Sp1g10800 Schrenkiella parvula HOM05D009328 ORTHO05D008690 9.4e-16 89.4 176 41.5
Thhalv10024007m.g Eutrema salsugineum HOM05D009328 ORTHO05D008690 3.6e-15 87.4 189 36.5
HanXRQChr13g0394961 Helianthus annuus HOM05D007929 ORTHO05D008690 3.6e-15 87.4 176 36.4
BcaB02g06406 Brassica carinata HOM05D009328 ORTHO05D008690 6.1e-15 86.7 323 31.9
A09p64080 Brassica napus HOM05D009328 ORTHO05D008690 6.1e-15 86.7 151 40.4
C05p11050 Brassica napus HOM05D009328 ORTHO05D008690 6.1e-15 86.7 305 31.5
BraA09t41754Z Brassica rapa HOM05D009328 ORTHO05D008690 6.1e-15 86.7 151 40.4
Sp2g02060 Schrenkiella parvula HOM05D009328 ORTHO05D008690 8.0e-15 86.3 209 33.0
C08p47680 Brassica napus HOM05D009328 ORTHO05D008690 1.4e-14 85.5 187 36.9
Cc08_g12850 Coffea canephora HOM05D007929 ORTHO05D008690 1.4e-14 85.5 591 24.9
CARHR012480 Cardamine hirsuta HOM05D009328 ORTHO05D008690 2.3e-14 84.7 191 39.3
BcaC07g41729 Brassica carinata HOM05D009328 ORTHO05D008690 3.0e-14 84.3 337 28.8
BolC5t29847H Brassica oleracea HOM05D009328 ORTHO05D008690 3.0e-14 84.3 305 31.1
BolC8t52307H Brassica oleracea HOM05D009328 ORTHO05D008690 3.0e-14 84.3 212 35.4
AT1G12120 Arabidopsis thaliana HOM05D009328 ORTHO05D008690 6.7e-14 83.2 273 32.2
A08p32980 Brassica napus HOM05D009328 ORTHO05D008690 8.8e-14 82.8 324 29.3
C08p15230 Brassica napus HOM05D009328 ORTHO05D008690 2.6e-13 81.3 352 28.4
BolC8t49153H Brassica oleracea HOM05D009328 ORTHO05D008690 2.6e-13 81.3 352 28.4
A06p09350 Brassica napus HOM05D009328 ORTHO05D008690 4.4e-13 80.5 311 33.1
ECA233G5449 Erigeron canadensis HOM05D007929 ORTHO05D008690 2.2e-12 78.2 529 23.3
BraA06t24123Z Brassica rapa HOM05D009328 ORTHO05D008690 2.8e-12 77.8 304 31.9
Lj2A212T45 Lonicera japonica HOM05D007929 ORTHO05D008690 2.4e-11 74.7 505 25.7
Migut.A00812 Erythranthe guttata HOM05D007929 ORTHO05D008690 7.0e-11 73.2 389 25.7
Carub.0001s1181 Capsella rubella HOM05D009328 ORTHO05D008690 1.2e-10 72.4 356 28.7
HPP92_015027 Vanilla planifolia HOM05D007929 ORTHO05D008690 2.2e-09 68.2 175 29.7
AL1G23390 Arabidopsis lyrata HOM05D009328 ORTHO05D008690 8.5e-09 66.2 462 25.1
TAR375G1016 Trochodendron aralioides HOM05D007929 ORTHO05D008690 1.1e-08 65.9 253 28.1
Aa31LG4G11510 Aethionema arabicum HOM05D001536 ORTHO05D001442 7.2e-08 63.2 138 30.4
HPP92_007417 Vanilla planifolia HOM05D007929 ORTHO05D008690 9.4e-08 62.8 176 31.2
MBI19_g16681_MAGBIO Magnolia biondii HOM05D001536 ORTHO05D001442 1.6e-07 62.0 55 50.9
HPP92_001620 Vanilla planifolia HOM05D001536 ORTHO05D001442 1.6e-07 62.0 65 46.2
CDE07G1318 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 2.7e-07 61.2 81 39.5
Lalb_Chr17g0340961 Lupinus albus HOM05D001536 ORTHO05D001442 3.6e-07 60.8 104 32.7
unitig_21.g20860 Utricularia gibba HOM05D001536 ORTHO05D001442 4.7e-07 60.5 128 30.5
ATR0111G010 Amborella trichopoda HOM05D001536 ORTHO05D001442 6.1e-07 60.1 73 52.1
AL2G28470 Arabidopsis lyrata HOM05D001536 ORTHO05D001442 8.0e-07 59.7 109 35.8
CSS0006220 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 8.0e-07 59.7 127 32.3
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 8.0e-07 59.7 102 34.3
BcaC01g01751 Brassica carinata HOM05D001536 ORTHO05D001442 1.0e-06 59.3 141 31.2
C03p72300 Brassica napus HOM05D001536 ORTHO05D001442 1.0e-06 59.3 141 31.2
BolC3t19525H Brassica oleracea HOM05D001536 ORTHO05D001442 1.0e-06 59.3 141 31.2
CSS0003937 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.0e-06 59.3 57 45.6
CSS0012767 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.0e-06 59.3 57 45.6
CDE12G0741 Ceratophyllum demersum HOM05D038938 ORTHO05D008690 1.0e-06 59.3 212 26.4
FAN17G0931 Fragaria x ananassa HOM05D001536 ORTHO05D001442 1.4e-06 58.9 72 40.3
COL.COLO4_12251 Corchorus olitorius HOM05D001536 ORTHO05D001442 2.3e-06 58.2 121 30.6
Thhalv10018101m.g Eutrema salsugineum HOM05D001536 ORTHO05D001442 2.3e-06 58.2 128 35.2
SGA_v2.0_scaffold287G47150 Striga asiatica HOM05D001536 ORTHO05D001442 2.3e-06 58.2 92 34.8
arahy.Tifrunner.gnm1.ann1.ULDL2L Arachis hypogaea HOM05D001536 ORTHO05D001442 4.0e-06 57.4 105 32.4
Carub.0001s2441 Capsella rubella HOM05D001536 ORTHO05D001442 4.0e-06 57.4 126 31.7
CARHR275060 Cardamine hirsuta HOM05D011375 ORTHO05D013410 4.0e-06 57.4 65 49.2
Eucgr.B03182 Eucalyptus grandis HOM05D001536 ORTHO05D001442 4.0e-06 57.4 96 31.2
FAN07G0538 Fragaria x ananassa HOM05D001536 ORTHO05D001442 4.0e-06 57.4 54 50.0
FAN22G0581 Fragaria x ananassa HOM05D001536 ORTHO05D001442 4.0e-06 57.4 54 50.0
Nn3g17370 Nelumbo nucifera HOM05D001536 ORTHO05D001442 4.0e-06 57.4 46 52.2
Eucgr.G02465 Eucalyptus grandis HOM05D001536 ORTHO05D001442 5.2e-06 57.0 95 34.7
TWI32G0259 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 5.2e-06 57.0 123 30.1
Aqoxy3G00455 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 6.8e-06 56.6 51 47.1
CSS0014793 Camellia sinensis var. sinensis HOM05D007929 ORTHO05D008690 6.8e-06 56.6 55 50.9
CANSAT64G3017 Cannabis sativa HOM05D001536 ORTHO05D001442 6.8e-06 56.6 133 32.3
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 6.8e-06 56.6 102 33.3
FvH4_4g30520 Fragaria vesca HOM05D001536 ORTHO05D001442 6.8e-06 56.6 54 48.1
FAN12G2957 Fragaria x ananassa HOM05D001536 ORTHO05D001442 6.8e-06 56.6 54 48.1
MD17G1054900 Malus domestica HOM05D001536 ORTHO05D001442 6.8e-06 56.6 129 31.0
TAR622G0794 Trochodendron aralioides HOM05D001536 ORTHO05D001442 6.8e-06 56.6 115 31.3
arahy.Tifrunner.gnm1.ann1.B15RMV Arachis hypogaea HOM05D001536 ORTHO05D001442 8.8e-06 56.2 85 36.5
arahy.Tifrunner.gnm1.ann1.BZ8U3A Arachis hypogaea HOM05D001536 ORTHO05D001442 8.8e-06 56.2 105 32.4
Ciclev10030574m.g Citrus clementina HOM05D001536 ORTHO05D001442 8.8e-06 56.2 114 33.3
Dinv38763 Davidia involucrata HOM05D001536 ORTHO05D001442 8.8e-06 56.2 104 33.7
FAN05G3557 Fragaria x ananassa HOM05D001536 ORTHO05D001442 8.8e-06 56.2 119 33.6
Rhsim10G0034500 Rhododendron simsii HOM05D001536 ORTHO05D001442 8.8e-06 56.2 128 34.4
Sc04g0007760 Simmondsia chinensis HOM05D001536 ORTHO05D001442 8.8e-06 56.2 169 29.6


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