Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 5.1e-199 697.6 365 100.0
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 2.0e-110 403.3 377 58.6
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.4e-100 370.5 368 55.4
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 4.2e-100 369.0 372 55.1
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.2e-99 367.5 397 53.4
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 8.4e-93 344.7 362 54.4
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 2.5e-92 343.2 371 52.6
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 4.2e-92 342.4 367 52.6
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.2e-91 340.9 362 54.7
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 2.1e-91 340.1 367 52.3
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 1.0e-90 337.8 373 51.2
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 1.1e-89 334.3 362 51.4
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 1.3e-88 330.9 367 50.1
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 1.6e-88 330.5 368 51.9
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 6.3e-88 328.6 363 51.5
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 8.2e-88 328.2 368 52.2
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 8.2e-88 328.2 363 54.3
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 1.8e-87 327.0 363 51.5
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 4.1e-87 325.9 370 51.1
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 6.9e-87 325.1 370 52.7
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 6.9e-87 325.1 366 50.3
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 9.0e-87 324.7 364 51.4
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 1.2e-86 324.3 366 48.4
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 2.0e-86 323.6 373 49.6
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 2.6e-86 323.2 369 51.2
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 2.2e-85 320.1 366 49.7
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 5.0e-85 318.9 372 49.2
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 1.4e-84 317.4 369 50.1
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 1.4e-84 317.4 365 52.1
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.9e-84 317.0 363 49.9
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 1.2e-83 314.3 364 50.5
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.6e-83 313.9 372 48.7
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 1.6e-83 313.9 361 51.2
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 2.7e-83 313.2 373 49.3
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 2.7e-83 313.2 379 48.8
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 6.1e-83 312.0 361 49.6
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 1.0e-82 311.2 360 50.8
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 1.8e-82 310.5 373 49.1
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 3.0e-82 309.7 360 50.8
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 3.9e-82 309.3 374 49.7
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 6.7e-82 308.5 373 47.7
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.1e-81 307.8 370 50.0
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 2.0e-81 307.0 370 49.7
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 2.0e-81 307.0 370 47.6
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 3.3e-81 306.2 379 49.6
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 4.3e-81 305.8 370 49.7
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 5.7e-81 305.4 381 45.9
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 5.7e-81 305.4 375 49.6
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 7.4e-81 305.1 370 49.2
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 9.7e-81 304.7 365 48.8
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 1.3e-80 304.3 371 49.6
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 1.7e-80 303.9 375 48.5
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 1.7e-80 303.9 369 49.6
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.7e-80 302.8 375 49.1
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 4.8e-80 302.4 362 47.5
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 8.2e-80 301.6 376 47.3
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 4.5e-78 295.8 364 48.1
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 4.5e-78 295.8 360 50.3
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.9e-77 293.1 369 47.4
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 6.5e-77 292.0 362 47.5
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 8.5e-77 291.6 413 44.6
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 3.2e-76 289.7 373 47.2
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 5.5e-76 288.9 382 47.6
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 2.1e-75 287.0 454 42.5
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 6.1e-75 285.4 363 47.4
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 6.1e-75 285.4 322 50.6
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.8e-71 273.9 390 45.6
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 4.1e-71 272.7 415 44.6
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 2.0e-70 270.4 228 58.8
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.0e-70 270.4 309 51.1
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 7.2e-68 261.9 230 60.0
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 3.0e-66 256.5 374 46.0
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 5.7e-65 252.3 276 53.6
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 1.3e-64 251.1 245 55.1
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 5.3e-63 245.7 361 44.0
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 1.3e-61 241.1 236 53.4
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 5.0e-61 239.2 230 57.0
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 6.5e-61 238.8 314 47.1
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 2.5e-60 236.9 362 39.8
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 4.2e-60 236.1 378 41.0
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 5.5e-60 235.7 348 40.8
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 2.1e-59 233.8 376 42.0
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 8.0e-59 231.9 282 47.9
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 3.0e-58 229.9 474 39.0
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 6.8e-58 228.8 339 42.8
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 2.6e-57 226.9 243 50.6
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.4e-57 226.1 259 49.8
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 5.7e-57 225.7 368 40.8
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 7.0e-55 218.8 236 50.8
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.6e-54 217.6 246 48.4
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 2.9e-53 213.4 268 48.9
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 2.7e-51 206.8 383 35.2
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.5e-49 201.1 257 46.3
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 2.6e-49 200.3 150 66.0
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 3.4e-49 199.9 258 46.5
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 9.8e-49 198.4 244 49.6
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 1.3e-48 198.0 263 47.5
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 2.4e-47 193.7 274 43.8
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 7.0e-47 192.2 272 45.6
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 9.5e-44 181.8 229 45.9
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 1.0e-42 178.3 235 43.8
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 2.3e-42 177.2 389 35.2
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 5.7e-41 172.6 380 32.9
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 7.5e-41 172.2 373 34.9
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 1.1e-36 158.3 229 42.4
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 2.8e-35 153.7 218 45.4
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 4.7e-35 152.9 285 37.5
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 2.3e-34 150.6 316 32.3
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 3.0e-29 133.7 141 52.5
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 1.2e-27 128.3 158 50.0
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 1.2e-27 128.3 158 50.0
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 6.2e-27 125.9 205 43.4
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 5.4e-23 112.8 235 34.5
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 6.6e-21 105.9 91 59.3
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.1e-20 105.1 97 55.7
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 1.9e-20 104.4 185 40.5
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 8.1e-19 99.0 61 75.4
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 1.1e-18 98.6 277 30.7
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 6.8e-18 95.9 112 46.4
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.4e-17 93.6 64 70.3
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 2.1e-11 74.3 62 56.5
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 1.5e-09 68.2 94 47.9
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 3.4e-09 67.0 75 50.7
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 4.2e-07 60.1 50 58.0
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 4.2e-07 60.1 50 58.0


User provided reference genes

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