Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0004450 Simmondsia chinensis HOM05D000686 ORTHO05D000512 1.9e-23 111.7 58 100.0
Hma1.2p1_2353F.1_g320510 Hydrangea macrophylla HOM05D000686 ORTHO05D000512 4.1e-10 67.4 56 55.4
Hund22433 Selenicereus undatus HOM05D000686 ORTHO05D000512 5.4e-10 67.0 56 53.6
QL11p044650 Quercus lobata HOM05D000686 ORTHO05D000512 1.2e-09 65.9 57 61.4
DCAR_010119 Daucus carota HOM05D000686 ORTHO05D000512 3.5e-09 64.3 57 52.6
DCAR_010120 Daucus carota HOM05D000686 ORTHO05D000512 4.6e-09 63.9 57 54.4
EL10Ac9g22927 Beta vulgaris HOM05D000686 ORTHO05D000512 1.0e-08 62.8 58 53.4
AUR62015214 Chenopodium quinoa HOM05D000686 ORTHO05D000512 1.0e-08 62.8 55 54.5
AUR62015216 Chenopodium quinoa HOM05D000686 ORTHO05D000512 1.0e-08 62.8 50 60.0
DCAR_014050 Daucus carota HOM05D000686 ORTHO05D000512 1.0e-08 62.8 58 53.4
DCAR_010121 Daucus carota HOM05D000686 ORTHO05D000512 1.3e-08 62.4 57 50.9
Actinidia01534 Actinidia chinensis HOM05D000686 ORTHO05D000512 3.0e-08 61.2 57 56.1
QL11p044638 Quercus lobata HOM05D000686 ORTHO05D000512 3.0e-08 61.2 57 56.1
TWI81G0232 Tripterygium wilfordii HOM05D000686 ORTHO05D000512 3.0e-08 61.2 57 56.1
Cfa021497 Carpinus fangiana HOM05D000686 ORTHO05D000512 1.5e-07 58.9 57 49.1
AUR62017680 Chenopodium quinoa HOM05D000686 ORTHO05D000512 1.5e-07 58.9 50 54.0
vmacro00910 Vaccinium macrocarpon HOM05D000686 ORTHO05D000512 1.5e-07 58.9 57 50.9
vmacro01140 Vaccinium macrocarpon HOM05D000686 ORTHO05D000512 1.5e-07 58.9 57 54.4
vmacro23121 Vaccinium macrocarpon HOM05D000686 ORTHO05D000512 1.5e-07 58.9 57 50.9
Prupe.8G046000 Prunus persica HOM05D000686 ORTHO05D000512 2.5e-07 58.2 57 52.6
MD10G1041900 Malus domestica HOM05D000686 ORTHO05D000512 5.6e-07 57.0 57 49.1
Cc10_g16200 Coffea canephora HOM05D000686 ORTHO05D000512 7.3e-07 56.6 56 44.6
DCAR_001851 Daucus carota HOM05D000686 ORTHO05D000512 7.3e-07 56.6 57 52.6
Lj7A415G60 Lonicera japonica HOM05D000686 ORTHO05D000512 7.3e-07 56.6 57 50.9
Oeu028612.1 Olea europaea HOM05D000686 ORTHO05D000512 7.3e-07 56.6 55 54.5
AUR62017678 Chenopodium quinoa HOM05D000686 ORTHO05D000512 1.2e-06 55.8 55 49.1
MD10G1042000 Malus domestica HOM05D000686 ORTHO05D000512 1.2e-06 55.8 57 50.9
Haze_14020 Corylus avellana HOM05D000686 ORTHO05D000512 1.6e-06 55.5 57 47.4
Lj7A415G61 Lonicera japonica HOM05D000686 ORTHO05D000512 1.6e-06 55.5 50 58.0
Cpa.g.sc21.241 Carica papaya HOM05D000686 ORTHO05D000512 2.1e-06 55.1 57 50.9
Oeu028613.1 Olea europaea HOM05D000686 ORTHO05D000512 2.8e-06 54.7 55 52.7
PGR142G1815 Punica granatum HOM05D000686 ORTHO05D000512 3.6e-06 54.3 55 52.7
Carub.0007s2592 Capsella rubella HOM05D000686 ORTHO05D000512 6.2e-06 53.5 58 53.4
Sp7g14090 Schrenkiella parvula HOM05D000686 ORTHO05D000512 6.2e-06 53.5 58 53.4
Solyc04g025650.3 Solanum lycopersicum HOM05D000686 ORTHO05D000512 6.2e-06 53.5 55 47.3
Nitab4.5_0000925g0120 Nicotiana tabacum HOM05D000686 ORTHO05D000512 8.1e-06 53.1 56 46.4
THA.LOC104821770 Tarenaya hassleriana HOM05D000686 ORTHO05D000512 8.1e-06 53.1 57 49.1
TAR376G0616 Trochodendron aralioides HOM05D000686 ORTHO05D000512 8.1e-06 53.1 54 57.4


User provided reference genes

Program Settings