Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0003810 Simmondsia chinensis HOM05D007190 ORTHO05D009130 1.3e-73 279.6 137 100.0
AUR62042313 Chenopodium quinoa HOM05D007190 ORTHO05D009130 2.9e-38 162.2 131 62.6
Ah.01g003840 Amaranthus hybridus HOM05D007190 ORTHO05D009130 1.8e-35 152.9 132 64.4
Hund07837 Selenicereus undatus HOM05D007190 ORTHO05D009130 1.1e-32 143.7 114 65.8
EL10Ac9g20875 Beta vulgaris HOM05D007190 ORTHO05D009130 3.5e-31 138.7 131 57.3
TWI14G0656 Tripterygium wilfordii HOM05D007190 ORTHO05D009130 1.7e-30 136.3 134 53.7
Cpa.g.sc209.23 Carica papaya HOM05D007190 ORTHO05D009130 2.5e-29 132.5 122 59.8
Thecc.01G243100 Theobroma cacao HOM05D007190 ORTHO05D009130 7.2e-29 131.0 142 52.1
CiPaw.03G185700 Carya illinoinensis HOM05D007190 ORTHO05D009130 1.2e-28 130.2 128 57.0
Dinv03920 Davidia involucrata HOM05D007190 ORTHO05D009130 1.2e-28 130.2 126 55.6
Prupe.3G124300 Prunus persica HOM05D007190 ORTHO05D009130 1.2e-28 130.2 119 60.5
Gorai.006G002000 Gossypium raimondii HOM05D007190 ORTHO05D009130 1.6e-28 129.8 141 52.5
Hma1.2p1_0178F.1_g079040 Hydrangea macrophylla HOM05D007190 ORTHO05D009130 1.6e-28 129.8 126 55.6
QL08p041327 Quercus lobata HOM05D007190 ORTHO05D009130 2.7e-28 129.0 128 54.7
TAR627G0601 Trochodendron aralioides HOM05D007190 ORTHO05D009130 2.7e-28 129.0 104 61.5
Actinidia30444 Actinidia chinensis HOM05D007190 ORTHO05D009130 6.1e-28 127.9 119 56.3
Lsat_1_v5_gn_8_139680 Lactuca sativa HOM05D007190 ORTHO05D009130 6.1e-28 127.9 140 50.7
Gohir.D09G001900 Gossypium hirsutum HOM05D007190 ORTHO05D009130 8.0e-28 127.5 141 51.8
Haze_13342 Corylus avellana HOM05D007190 ORTHO05D009130 1.0e-27 127.1 106 60.4
Rhsim04G0073500 Rhododendron simsii HOM05D007190 ORTHO05D009130 1.0e-27 127.1 114 55.3
Duzib264G1175 Durio zibethinus HOM05D007190 ORTHO05D009130 5.2e-27 124.8 145 49.7
Eucgr.K01098 Eucalyptus grandis HOM05D007190 ORTHO05D009130 5.2e-27 124.8 121 52.1
Potri.019G090600 Populus trichocarpa HOM05D007190 ORTHO05D009130 5.2e-27 124.8 135 53.3
Cfa014712 Carpinus fangiana HOM05D007190 ORTHO05D009130 6.7e-27 124.4 106 59.4
Sabra19G0104200 Salix brachista HOM05D007190 ORTHO05D009130 1.1e-26 123.6 135 53.3
CANSAT64G0866 Cannabis sativa HOM05D007190 ORTHO05D009130 2.6e-26 122.5 117 56.4
Sabra19G0100800 Salix brachista HOM05D007190 ORTHO05D009130 3.3e-26 122.1 134 53.0
MD09G1240300 Malus domestica HOM05D007190 ORTHO05D009130 1.3e-25 120.2 137 52.6
Gohir.A09G002200 Gossypium hirsutum HOM05D007190 ORTHO05D009130 2.8e-25 119.0 145 47.6
Atru.chr6.2820 Acer truncatum HOM05D007190 ORTHO05D009130 4.8e-25 118.2 109 57.8
HanXRQChr13g0392321 Helianthus annuus HOM05D007190 ORTHO05D009130 4.8e-25 118.2 123 48.8
Manes.13G138800 Manihot esculenta HOM05D007190 ORTHO05D009130 4.8e-25 118.2 130 51.5
Ca_01466_v3 Cicer arietinum L. HOM05D007190 ORTHO05D009130 6.3e-25 117.9 112 54.5
MELO3C014352.2 Cucumis melo HOM05D007190 ORTHO05D009130 8.2e-25 117.5 110 54.5
Psat5g275520 Pisum sativum HOM05D007190 ORTHO05D009130 8.2e-25 117.5 114 54.4
Lalb_Chr14g0367371 Lupinus albus HOM05D007190 ORTHO05D009130 1.1e-24 117.1 96 56.2
TPR.G11579 Trifolium pratense HOM05D007190 ORTHO05D009130 1.4e-24 116.7 111 55.0
RcHm_v2.0_Chr2g0129041 Rosa chinensis HOM05D007190 ORTHO05D009130 1.8e-24 116.3 114 55.3
CsaV3_6G037600 Cucumis sativus L. HOM05D007190 ORTHO05D009130 2.4e-24 115.9 117 53.8
ClCG09G011360 Citrullus lanatus HOM05D007190 ORTHO05D009130 4.1e-24 115.2 117 53.0
PSO675G8657 Papaver somniferum HOM05D007190 ORTHO05D009130 5.3e-24 114.8 107 56.1
Ciclev10015689m.g Citrus clementina HOM05D007190 ORTHO05D009130 1.2e-23 113.6 123 52.8
Carub.0001s0560 Capsella rubella HOM05D007190 ORTHO05D009130 2.0e-23 112.8 128 47.7
SGA_v2.0_scaffold9G04917 Striga asiatica HOM05D007190 ORTHO05D009130 2.0e-23 112.8 113 48.7
FvH4_6g27080 Fragaria vesca HOM05D007190 ORTHO05D009130 3.5e-23 112.1 107 54.2
Glyma.12G209200 Glycine max HOM05D007190 ORTHO05D009130 3.5e-23 112.1 111 53.2
Aa31LG1G7260 Aethionema arabicum HOM05D007190 ORTHO05D009130 7.7e-23 110.9 128 49.2
Lj3g0015265 Lotus japonicus HOM05D007190 ORTHO05D009130 7.7e-23 110.9 134 46.3
PGR142G3516 Punica granatum HOM05D007190 ORTHO05D009130 1.0e-22 110.5 138 45.7
FAN14G3381 Fragaria x ananassa HOM05D007190 ORTHO05D009130 1.3e-22 110.2 107 53.3
Medtr2g091140 Medicago truncatula HOM05D007190 ORTHO05D009130 1.3e-22 110.2 134 47.0
Sopen10g003930 Solanum pennellii HOM05D007190 ORTHO05D009130 2.2e-22 109.4 119 50.4
Nitab4.5_0007774g0060 Nicotiana tabacum HOM05D007190 ORTHO05D009130 2.9e-22 109.0 109 51.4
Phvul.005G096600 Phaseolus vulgaris HOM05D007190 ORTHO05D009130 3.8e-22 108.6 133 48.1
Aqoxy1G03215 Aquilegia oxysepala HOM05D007190 ORTHO05D009130 6.5e-22 107.8 99 54.5
PGSC0003DMG400010559 Solanum tuberosum HOM05D007190 ORTHO05D009130 6.5e-22 107.8 140 45.7
ATR0602G260 Amborella trichopoda HOM05D007190 ORTHO05D009130 1.1e-21 107.1 102 52.9
MBI07_g17046_MAGBIO Magnolia biondii HOM05D007190 ORTHO05D009130 1.9e-21 106.3 105 53.3
Sp1g05050 Schrenkiella parvula HOM05D007190 ORTHO05D009130 4.2e-21 105.1 126 46.8
MSTRG.20320 Avicennia marina HOM05D007190 ORTHO05D009130 7.2e-21 104.4 114 48.2
Solyc10g008060.4 Solanum lycopersicum HOM05D007190 ORTHO05D009130 7.2e-21 104.4 142 45.1
arahy.Tifrunner.gnm1.ann1.Y5LIHD Arachis hypogaea HOM05D007190 ORTHO05D009130 9.4e-21 104.0 96 50.0
CARHR005780 Cardamine hirsuta HOM05D007190 ORTHO05D009130 9.4e-21 104.0 132 45.5
Nitab4.5_0003291g0030 Nicotiana tabacum HOM05D007190 ORTHO05D009130 9.4e-21 104.0 147 43.5
Sed0016786 Sechium edule HOM05D007190 ORTHO05D009130 9.4e-21 104.0 103 52.4
AT1G06240 Arabidopsis thaliana HOM05D007190 ORTHO05D009130 1.2e-20 103.6 130 46.9
A08p36070 Brassica napus HOM05D007190 ORTHO05D009130 1.2e-20 103.6 127 48.0
BraA08t35513Z Brassica rapa HOM05D007190 ORTHO05D009130 1.2e-20 103.6 127 48.0
CAN.G782.8 Capsicum annuum HOM05D007190 ORTHO05D009130 1.6e-20 103.2 113 47.8
HPP92_004056 Vanilla planifolia HOM05D007190 ORTHO05D009130 2.1e-20 102.8 104 51.0
HPP92_004047 Vanilla planifolia HOM05D007190 ORTHO05D009130 4.7e-20 101.7 111 48.6
Cc05_g08090 Coffea canephora HOM05D007190 ORTHO05D009130 1.8e-19 99.8 159 40.3
AL1G16230 Arabidopsis lyrata HOM05D007190 ORTHO05D009130 3.0e-19 99.0 120 48.3
Migut.H02153 Erythranthe guttata HOM05D007190 ORTHO05D009130 4.0e-19 98.6 136 42.6
Thhalv10007851m.g Eutrema salsugineum HOM05D007190 ORTHO05D009130 1.5e-18 96.7 106 49.1
BolC8t47036H Brassica oleracea HOM05D007190 ORTHO05D009130 2.0e-18 96.3 127 44.9
BcaB03g13427 Brassica carinata HOM05D007190 ORTHO05D009130 3.4e-18 95.5 124 47.6
THA.LOC104800864 Tarenaya hassleriana HOM05D007190 ORTHO05D009130 4.4e-18 95.1 102 50.0
VMungo1080G0449 Vigna mungo HOM05D007190 ORTHO05D009130 7.5e-18 94.4 101 51.5
SalBow7G3091 Salvia bowleyana HOM05D007190 ORTHO05D009130 1.3e-17 93.6 111 45.9
Zm00001eb119970 Zea mays HOM05D007190 ORTHO05D009130 9.1e-16 87.4 138 41.3
C08p02440 Brassica napus HOM05D007190 ORTHO05D009130 3.5e-15 85.5 129 45.0
SMO180G0029 Selaginella moellendorffii HOM05D007190 ORTHO05D009130 2.9e-14 82.4 112 45.5
Os01g0214400 Oryza sativa ssp. japonica HOM05D007190 ORTHO05D009130 3.8e-14 82.0 136 39.7
Peaxi162Scf00241g00919 Petunia axillaris HOM05D007190 ORTHO05D009130 3.2e-13 79.0 126 38.9
GSVIVG01020671001 Vitis vinifera HOM05D007190 ORTHO05D009130 7.2e-13 77.8 56 67.9
CSS0041062 Camellia sinensis var. sinensis HOM05D007190 ORTHO05D009130 2.1e-12 76.3 56 64.3
vmacro09230 Vaccinium macrocarpon HOM05D007190 ORTHO05D009130 2.7e-12 75.9 71 54.9
Mapoly0003s0287 Marchantia polymorpha HOM05D007190 ORTHO05D009130 1.0e-11 73.9 104 38.5
Pp3c10_18540 Physcomitrium patens HOM05D007190 ORTHO05D009130 2.0e-10 69.7 127 34.6
Oeu038788.1 Olea europaea HOM05D007190 ORTHO05D009130 5.7e-10 68.2 51 62.7
ECA233G1920 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-09 66.6 101 41.6
CSS0031949 Camellia sinensis var. sinensis HOM05D007190 ORTHO05D009130 9.1e-08 60.8 45 62.2
unitig_744.g24492 Utricularia gibba HOM05D007190 ORTHO05D009130 1.2e-07 60.5 51 52.9
Zm00001eb168940 Zea mays HOM05D000493 ORTHO05D004733 5.9e-07 58.2 112 37.5
Zm00001eb234580 Zea mays HOM05D000013 ORTHO05D006827 7.7e-07 57.8 112 36.6
CSS0016016 Camellia sinensis var. sinensis HOM05D007190 ORTHO05D009130 8.6e-06 54.3 49 53.1


User provided reference genes

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