Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0003710 Simmondsia chinensis HOM05D000010 ORTHO05D048681 1.4e-59 232.6 112 100.0
RcHm_v2.0_Chr6g0249541 Rosa chinensis HOM05D000010 ORTHO05D000063 4.0e-09 65.1 75 48.0
Gohir.A08G230200 Gossypium hirsutum HOM05D000010 ORTHO05D000063 1.5e-08 63.2 69 55.1
Gohir.D08G250600 Gossypium hirsutum HOM05D000010 ORTHO05D000063 1.5e-08 63.2 69 55.1
Gorai.004G267300 Gossypium raimondii HOM05D000010 ORTHO05D000063 1.5e-08 63.2 69 55.1
Prupe.8G002500 Prunus persica HOM05D000010 ORTHO05D000063 1.5e-08 63.2 73 50.7
Sp6g07070 Schrenkiella parvula HOM05D000010 ORTHO05D000063 1.3e-07 60.1 106 37.7
MD05G1005600 Malus domestica HOM05D000010 ORTHO05D048681 3.7e-07 58.5 74 51.4
MD10G1000900 Malus domestica HOM05D000010 ORTHO05D000063 3.7e-07 58.5 74 50.0
Hma1.2p1_0378F.1_g139690 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 4.8e-07 58.2 75 48.0
FvH4_2g00240 Fragaria vesca HOM05D000010 ORTHO05D000063 1.1e-06 57.0 79 48.1
GSVIVG01037113001 Vitis vinifera HOM05D000010 ORTHO05D000063 1.4e-06 56.6 69 50.7
FAN24G1425 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.8e-06 56.2 79 46.8
MBI06_g43035_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000063 1.8e-06 56.2 79 45.6
Nn5g27174 Nelumbo nucifera HOM05D000010 ORTHO05D000063 1.8e-06 56.2 69 52.2
BcaC04g21031 Brassica carinata HOM05D000010 ORTHO05D000063 2.4e-06 55.8 70 44.3
A09p28730 Brassica napus HOM05D001742 ORTHO05D001689 2.4e-06 55.8 70 44.3
C09p36470 Brassica napus HOM05D001742 ORTHO05D001689 2.4e-06 55.8 70 44.3
BolC9t56482H Brassica oleracea HOM05D000010 ORTHO05D000063 2.4e-06 55.8 70 44.3
BraA09t38433Z Brassica rapa HOM05D000010 ORTHO05D000063 2.4e-06 55.8 70 44.3
QL03p011486 Quercus lobata HOM05D000010 ORTHO05D000063 2.4e-06 55.8 81 45.7
BcaB01g02754 Brassica carinata HOM05D000010 ORTHO05D000063 4.1e-06 55.1 70 44.3
BcaC01g04679 Brassica carinata HOM05D000010 ORTHO05D000063 4.1e-06 55.1 70 44.3
A03p28960 Brassica napus HOM05D000010 ORTHO05D000063 4.1e-06 55.1 70 44.3
C03p35000 Brassica napus HOM05D000010 ORTHO05D000063 4.1e-06 55.1 70 44.3
BolC3t15812H Brassica oleracea HOM05D000010 ORTHO05D000063 4.1e-06 55.1 70 44.3
BraA03t12094Z Brassica rapa HOM05D000010 ORTHO05D000063 4.1e-06 55.1 70 44.3
CSS0010251 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 4.1e-06 55.1 71 50.7
AL6G44220 Arabidopsis lyrata HOM05D000010 ORTHO05D000063 7.0e-06 54.3 70 44.3
CiPaw.04G007100 Carya illinoinensis HOM05D000010 ORTHO05D000063 9.1e-06 53.9 80 46.2
Haze_14037 Corylus avellana HOM05D000010 ORTHO05D000063 9.1e-06 53.9 81 46.9


User provided reference genes

Program Settings