Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0003480 Simmondsia chinensis HOM05D000920 ORTHO05D000626 3.0e-81 305.1 147 100.0
Sc21g0003260 Simmondsia chinensis HOM05D000920 ORTHO05D000626 5.7e-40 167.9 82 97.6
Sc21g0003270 Simmondsia chinensis HOM05D000920 ORTHO05D004854 2.2e-31 139.4 66 100.0
ScUNg0001140 Simmondsia chinensis HOM05D000920 ORTHO05D000626 8.8e-25 117.5 83 74.7
unitig_547.g33738 Utricularia gibba HOM05D000920 ORTHO05D000626 1.1e-22 110.5 82 72.0
unitig_680.g33583 Utricularia gibba HOM05D000920 ORTHO05D000626 1.1e-22 110.5 82 72.0
unitig_798.g32494 Utricularia gibba HOM05D000920 ORTHO05D000626 1.1e-22 110.5 82 72.0
Atru.chr9.100 Acer truncatum HOM05D000920 ORTHO05D000626 5.5e-19 98.2 69 75.4
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 9.5e-19 97.4 69 72.5
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 2.8e-18 95.9 98 56.1
unitig_146.g30252 Utricularia gibba HOM05D000920 ORTHO05D004854 1.4e-17 93.6 100 58.0
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 1.8e-17 93.2 103 54.4
unitig_102.g31721 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-17 92.0 82 62.2
unitig_130.g30130 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-17 92.0 82 62.2
unitig_139.g29609 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-17 92.0 82 62.2
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 4.0e-17 92.0 69 72.5
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 4.0e-17 92.0 69 72.5
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 4.0e-17 92.0 69 72.5
unitig_682.g30168 Utricularia gibba HOM05D000920 ORTHO05D000626 4.0e-17 92.0 69 72.5
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 4.0e-17 92.0 69 72.5
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 4.0e-17 92.0 69 72.5
unitig_783.g29408 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-17 92.0 82 62.2
unitig_792.g32521 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-17 92.0 82 62.2
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 4.0e-17 92.0 69 72.5
unitig_814.g34350 Utricularia gibba HOM05D000920 ORTHO05D003704 4.0e-17 92.0 69 72.5
unitig_892.g32991 Utricularia gibba HOM05D001018 ORTHO05D000626 4.0e-17 92.0 82 62.2
unitig_172.g35454 Utricularia gibba HOM05D001018 ORTHO05D000626 2.0e-16 89.7 76 64.5
Sc06g0003820 Simmondsia chinensis HOM05D000920 ORTHO05D000626 4.4e-16 88.6 69 68.1
Sopen00g001770 Solanum pennellii HOM05D000920 ORTHO05D004854 2.8e-15 85.9 91 56.0
unitig_678.g33163 Utricularia gibba HOM05D001018 ORTHO05D000626 3.7e-15 85.5 82 58.5
unitig_269.g35314 Utricularia gibba HOM05D001018 ORTHO05D000626 8.3e-15 84.3 82 58.5
Sc21g0003490 Simmondsia chinensis HOM05D000920 ORTHO05D000626 1.4e-14 83.6 69 62.3
RhsimUnG0194800 Rhododendron simsii HOM05D000920 ORTHO05D000626 1.0e-12 77.4 63 61.9
Sc21g0003410 Simmondsia chinensis HOM05D000920 ORTHO05D014976 1.3e-12 77.0 67 62.7
Sc14g0003760 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.6e-12 74.7 49 75.5
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 6.6e-12 74.7 59 67.8
Sopen00g001850 Solanum pennellii HOM05D001018 ORTHO05D000626 1.1e-11 73.9 59 64.4
EL10As7g23722 Beta vulgaris HOM05D000920 ORTHO05D000626 2.5e-11 72.8 60 63.3
unitig_174.g29159 Utricularia gibba HOM05D001018 ORTHO05D000626 2.5e-11 72.8 82 53.7
Sopen12g025310 Solanum pennellii HOM05D000920 ORTHO05D000626 3.3e-11 72.4 59 64.4
unitig_579.g34807 Utricularia gibba HOM05D001018 ORTHO05D000626 5.6e-11 71.6 82 52.4
Phvul.003G090100 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 9.5e-11 70.9 64 57.8
Cpa.g.sc15.36 Carica papaya HOM05D000920 ORTHO05D000626 1.4e-09 67.0 49 65.3
Phvul.002G055350 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 1.4e-09 67.0 47 70.2
Zm00001eb263670 Zea mays HOM05D010106 ORTHO05D000626 1.4e-09 67.0 58 62.1
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 1.8e-09 66.6 82 47.6
Sopen06g008620 Solanum pennellii HOM05D000920 ORTHO05D000626 2.3e-09 66.2 123 41.5
Sc21g0003450 Simmondsia chinensis HOM05D000920 ORTHO05D014976 3.1e-09 65.9 53 64.2
Zm00001eb263570 Zea mays HOM05D000920 ORTHO05D000626 8.9e-09 64.3 82 48.8
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 1.2e-08 63.9 61 60.7
EL10Ac4g09822 Beta vulgaris HOM05D000920 ORTHO05D000626 1.5e-08 63.5 66 57.6
unitig_885.g34269 Utricularia gibba HOM05D001018 ORTHO05D000626 1.5e-08 63.5 50 66.0
Sc03g0004690 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.0e-08 63.2 50 62.0
unitig_579.g34818 Utricularia gibba HOM05D001018 ORTHO05D000626 2.0e-08 63.2 82 47.6
TAR371G1186 Trochodendron aralioides HOM05D005014 ORTHO05D003704 9.8e-08 60.8 44 68.2
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 9.8e-08 60.8 50 64.0
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 9.8e-08 60.8 50 64.0
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 3.7e-07 58.9 69 55.1
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 4.9e-07 58.5 47 66.0
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 4.9e-07 58.5 47 66.0
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 4.9e-07 58.5 49 63.3
Glyma.13G011200 Glycine max HOM05D001018 ORTHO05D000626 1.9e-06 56.6 72 47.2
unitig_721.g34549 Utricularia gibba HOM05D001018 ORTHO05D000626 2.4e-06 56.2 63 50.8
unitig_8.g4073 Utricularia gibba HOM05D000920 ORTHO05D004854 9.2e-06 54.3 59 54.2


User provided reference genes

Program Settings