Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0003270 Simmondsia chinensis HOM05D000920 ORTHO05D004854 1.8e-93 345.9 172 100.0
Sc21g0003480 Simmondsia chinensis HOM05D000920 ORTHO05D000626 3.3e-31 139.0 66 100.0
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 5.1e-16 88.6 54 83.3
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 5.1e-16 88.6 54 83.3
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 4.4e-15 85.5 55 80.0
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 5.7e-15 85.1 53 81.1
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 5.7e-15 85.1 53 81.1
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-14 83.2 54 79.6
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 2.8e-14 82.8 53 77.4
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 8.2e-14 81.3 54 79.6
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 9.1e-13 77.8 132 44.7
Oeu043254.2 Olea europaea HOM05D000920 ORTHO05D022949 1.2e-12 77.4 48 81.2
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 1.5e-12 77.0 56 75.0
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 2.0e-12 76.6 43 88.4
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 2.0e-12 76.6 46 82.6
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 2.0e-12 76.6 46 82.6
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 2.0e-12 76.6 46 82.6
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 2.0e-12 76.6 46 82.6
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 2.0e-12 76.6 82 52.4
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 3.4e-12 75.9 43 88.4
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 3.4e-12 75.9 54 74.1
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 3.4e-12 75.9 54 75.9
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 3.4e-12 75.9 54 74.1
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 4.5e-12 75.5 43 86.0
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 4.5e-12 75.5 43 88.4
Sc21g0003410 Simmondsia chinensis HOM05D000920 ORTHO05D014976 4.5e-12 75.5 71 60.6
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 5.9e-12 75.1 55 70.9
Sc14g0003760 Simmondsia chinensis HOM05D007167 ORTHO05D013628 7.7e-12 74.7 49 75.5
Zm00001eb439260 Zea mays HOM05D010106 ORTHO05D000626 7.7e-12 74.7 49 75.5
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 1.0e-11 74.3 48 77.1
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 2.2e-11 73.2 145 42.8
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 5.0e-11 72.0 46 78.3
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 8.5e-11 71.2 46 78.3
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 1.1e-10 70.9 45 77.8
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 1.1e-10 70.9 49 75.5
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-10 70.5 59 67.8
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 1.4e-10 70.5 43 81.4
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 2.5e-10 69.7 46 78.3
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 4.2e-10 68.9 63 63.5
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.4e-10 67.8 186 33.3
Sc21g0003450 Simmondsia chinensis HOM05D000920 ORTHO05D014976 2.7e-09 66.2 53 64.2
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 2.7e-09 66.2 37 86.5
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 4.7e-09 65.5 48 70.8
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 8.0e-09 64.7 189 37.6
Sc03g0004690 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.3e-08 63.2 50 62.0
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 2.0e-07 60.1 46 71.7
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 2.6e-07 59.7 51 64.7
Oeu024742.1 Olea europaea HOM05D007167 ORTHO05D001679 7.4e-07 58.2 40 72.5
BNapus_Darmor_BZH_scaffold_107p00380 Brassica napus HOM05D000920 ORTHO05D004854 9.7e-07 57.8 43 72.1
BNapus_Darmor_BZH_scaffold_107p00320 Brassica napus HOM05D000920 ORTHO05D004854 2.8e-06 56.2 34 85.3
A05p22130 Brassica napus HOM05D000920 ORTHO05D004854 8.2e-06 54.7 55 65.5


User provided reference genes

Program Settings