Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 4.6e-230 800.8 386 100.0
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.8e-146 523.1 391 65.5
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 7.7e-145 517.7 382 64.1
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.2e-143 512.3 344 70.3
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 5.5e-143 511.5 373 66.2
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 2.3e-141 506.1 377 64.5
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.0e-140 503.1 328 69.5
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 3.7e-139 498.8 327 71.3
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.4e-138 496.9 346 68.5
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 2.4e-138 496.1 336 67.3
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 2.4e-138 496.1 336 67.3
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 9.1e-138 494.2 459 56.6
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.6e-137 493.4 424 59.0
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 7.7e-137 491.1 374 62.0
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.0e-136 490.7 388 62.9
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 6.5e-136 488.0 355 64.5
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 6.5e-136 488.0 375 62.4
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 6.5e-136 488.0 352 65.3
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.9e-135 486.5 375 62.1
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 9.4e-135 484.2 334 66.8
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 2.7e-134 482.6 397 60.7
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.8e-133 479.9 361 65.1
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.0e-133 479.2 381 62.2
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.0e-133 479.2 343 64.4
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 8.8e-133 477.6 327 67.0
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 2.0e-132 476.5 327 67.6
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.0e-132 476.5 338 66.9
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 2.6e-132 476.1 348 65.8
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 2.6e-132 476.1 384 61.2
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 4.4e-132 475.3 331 68.3
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 5.7e-132 474.9 378 62.4
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 7.5e-132 474.6 329 67.5
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 9.8e-132 474.2 326 66.0
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 2.2e-131 473.0 349 65.6
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 2.2e-131 473.0 384 61.2
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.1e-130 470.7 363 64.2
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.4e-130 470.3 374 62.6
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.8e-130 469.9 374 61.0
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.4e-130 469.5 325 65.5
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 2.4e-130 469.5 374 61.2
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 5.4e-130 468.4 351 64.4
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 3.5e-129 465.7 328 65.5
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 5.9e-129 464.9 366 60.7
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 3.8e-128 462.2 331 63.1
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 8.6e-128 461.1 405 56.0
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 3.2e-127 459.1 357 62.5
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 4.2e-127 458.8 397 58.7
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 7.2e-127 458.0 332 64.2
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 7.2e-127 458.0 312 68.3
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.6e-126 456.8 369 61.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 2.1e-126 456.4 344 62.8
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 2.1e-126 456.4 355 60.6
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.0e-125 454.1 332 63.3
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.0e-125 454.1 332 63.6
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.0e-125 454.1 332 63.6
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 1.4e-125 453.8 361 59.8
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.8e-125 453.4 365 60.0
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.3e-125 453.0 348 60.3
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.2e-124 450.7 332 63.0
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.2e-124 450.7 332 63.0
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 3.4e-124 449.1 332 63.3
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 4.4e-124 448.7 367 58.6
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 4.4e-124 448.7 326 62.6
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 7.5e-124 448.0 326 63.8
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 9.8e-124 447.6 325 63.1
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 9.2e-122 441.0 331 62.5
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.2e-121 440.7 327 63.6
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.3e-120 437.2 360 56.4
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.3e-120 437.2 326 61.7
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 3.8e-120 435.6 372 56.5
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.2e-118 430.6 371 56.3
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.5e-116 423.7 327 61.5
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.6e-116 422.9 331 60.7
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 9.8e-116 421.0 381 54.3
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 5.4e-114 415.2 326 59.8
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.6e-113 413.7 363 59.0
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 4.7e-110 402.1 328 57.6
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 6.2e-110 401.7 387 52.7
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.8e-109 400.2 378 55.3
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.3e-107 394.0 327 59.9
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 8.3e-107 391.3 492 44.7
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.9e-106 390.2 307 61.2
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.7e-105 386.3 352 54.5
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.3e-104 383.3 351 54.7
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 5.0e-104 382.1 273 62.6
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.2e-102 377.5 323 57.6
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 8.1e-102 374.8 323 57.6
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.4e-101 374.0 326 56.1
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 9.9e-100 367.9 242 67.8
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 7.1e-98 361.7 262 61.5
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 6.6e-96 355.1 290 58.6
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.1e-93 347.8 310 54.2
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.5e-92 344.0 268 60.8
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.2e-86 324.3 334 51.2
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.9e-80 302.8 233 59.7
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 4.3e-79 299.3 321 47.4
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.3e-78 297.7 318 47.5
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 9.0e-77 291.6 369 44.4
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.6e-70 270.8 164 70.7
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.2e-68 264.6 192 63.0
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.1e-66 258.1 325 42.2
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.5e-63 246.9 358 40.5
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 2.2e-35 154.1 100 72.0
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.1e-34 151.8 159 49.7
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.9e-26 124.4 78 69.2
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 4.4e-23 113.2 99 55.6
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.2e-18 97.1 68 73.5
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 8.0e-17 92.4 97 48.5
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.5e-12 77.0 56 62.5
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 9.5e-10 68.9 49 63.3
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.4e-08 65.1 39 66.7
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 2.3e-08 64.3 51 64.7


User provided reference genes

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