Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0001180 Simmondsia chinensis HOM05D002897 ORTHO05D007570 1.1e-80 303.1 143 100.0
Hund20232 Selenicereus undatus HOM05D002897 ORTHO05D007570 1.0e-57 226.9 143 74.1
Ah.13g074350 Amaranthus hybridus HOM05D002897 ORTHO05D007570 1.0e-54 216.9 116 83.6
AUR62006482 Chenopodium quinoa HOM05D002897 ORTHO05D007570 6.7e-54 214.2 143 70.6
Actinidia09728 Actinidia chinensis HOM05D002897 ORTHO05D007570 8.8e-54 213.8 144 68.1
Actinidia13739 Actinidia chinensis HOM05D002897 ORTHO05D007570 8.8e-54 213.8 144 72.2
EL10Ac3g06311 Beta vulgaris HOM05D002897 ORTHO05D007570 8.8e-54 213.8 110 88.2
AUR62002619 Chenopodium quinoa HOM05D002897 ORTHO05D007570 5.7e-53 211.1 110 85.5
AUR62030035 Chenopodium quinoa HOM05D002897 ORTHO05D007570 7.5e-53 210.7 143 71.3
Oeu031218.1 Olea europaea HOM05D002897 ORTHO05D007570 2.2e-52 209.1 110 83.6
TWI75G1337 Tripterygium wilfordii HOM05D002897 ORTHO05D007570 2.8e-52 208.8 143 67.8
AUR62022566 Chenopodium quinoa HOM05D002897 ORTHO05D007570 3.7e-52 208.4 110 85.5
Ciclev10017105m.g Citrus clementina HOM05D002897 ORTHO05D007570 3.7e-52 208.4 110 86.4
Cc05_g03210 Coffea canephora HOM05D002897 ORTHO05D007570 6.3e-52 207.6 144 69.4
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 6.3e-52 207.6 144 68.8
MSTRG.12280 Avicennia marina HOM05D002897 ORTHO05D007570 1.1e-51 206.8 145 71.0
CSS0041861 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D007570 1.1e-51 206.8 110 83.6
Cpa.g.sc132.6 Carica papaya HOM05D002897 ORTHO05D007570 1.1e-51 206.8 143 67.1
Eucgr.K00770 Eucalyptus grandis HOM05D002897 ORTHO05D007570 1.8e-51 206.1 144 68.8
QL08p031156 Quercus lobata HOM05D002897 ORTHO05D007570 1.8e-51 206.1 143 69.9
Atru.chr6.3237 Acer truncatum HOM05D002897 ORTHO05D007570 2.4e-51 205.7 110 84.5
SGA_v2.0_scaffold49G18347 Striga asiatica HOM05D002897 ORTHO05D007570 2.4e-51 205.7 147 65.3
TWI18G1070 Tripterygium wilfordii HOM05D002897 ORTHO05D007570 2.4e-51 205.7 143 65.7
SalBow1G7922 Salvia bowleyana HOM05D002897 ORTHO05D007570 4.1e-51 204.9 143 70.6
COL.COLO4_21856 Corchorus olitorius HOM05D002897 ORTHO05D007570 7.0e-51 204.1 109 82.6
ClCG02G002160 Citrullus lanatus HOM05D002897 ORTHO05D007570 9.1e-51 203.8 143 69.2
Lsat_1_v5_gn_9_106701 Lactuca sativa HOM05D002897 ORTHO05D007570 9.1e-51 203.8 143 67.8
MD09G1112200 Malus domestica HOM05D002897 ORTHO05D007570 9.1e-51 203.8 110 83.6
SalBow1G1468 Salvia bowleyana HOM05D002897 ORTHO05D007570 9.1e-51 203.8 143 69.9
CiPaw.03G157100 Carya illinoinensis HOM05D002897 ORTHO05D007570 1.6e-50 203.0 110 83.6
PGR142G0275 Punica granatum HOM05D002897 ORTHO05D007570 2.0e-50 202.6 114 80.7
Ca_03579_v3 Cicer arietinum L. HOM05D002897 ORTHO05D007570 2.7e-50 202.2 143 67.8
Thecc.01G180200 Theobroma cacao HOM05D002897 ORTHO05D007570 2.7e-50 202.2 110 83.6
arahy.Tifrunner.gnm1.ann1.0I3WMA Arachis hypogaea HOM05D002897 ORTHO05D007570 3.5e-50 201.8 115 80.0
arahy.Tifrunner.gnm1.ann1.P1R172 Arachis hypogaea HOM05D002897 ORTHO05D007570 3.5e-50 201.8 115 80.0
Cfa014330 Carpinus fangiana HOM05D002897 ORTHO05D007570 3.5e-50 201.8 110 81.8
FAN14G2228 Fragaria x ananassa HOM05D002897 ORTHO05D007570 4.5e-50 201.4 110 81.8
RcHm_v2.0_Chr2g0158451 Rosa chinensis HOM05D002897 ORTHO05D007570 4.5e-50 201.4 110 81.8
Sed0010664 Sechium edule HOM05D002897 ORTHO05D007570 5.9e-50 201.1 109 84.4
unitig_62.g23231 Utricularia gibba HOM05D002897 ORTHO05D007570 5.9e-50 201.1 135 70.4
FAN02G3971 Fragaria x ananassa HOM05D002897 ORTHO05D007570 7.7e-50 200.7 110 80.9
Haze_12785 Corylus avellana HOM05D002897 ORTHO05D007570 1.0e-49 200.3 110 81.8
Migut.H01236 Erythranthe guttata HOM05D002897 ORTHO05D007570 1.7e-49 199.5 148 69.6
MELO3C018840.2 Cucumis melo HOM05D002897 ORTHO05D007570 2.2e-49 199.1 143 67.8
Prupe.3G212500 Prunus persica HOM05D002897 ORTHO05D007570 2.2e-49 199.1 110 82.7
CsaV3_7G003350 Cucumis sativus L. HOM05D002897 ORTHO05D007570 2.9e-49 198.7 142 67.6
Duzib138G1435 Durio zibethinus HOM05D002897 ORTHO05D007570 3.8e-49 198.4 110 82.7
VMungo0647G0292 Vigna mungo HOM05D002897 ORTHO05D007570 3.8e-49 198.4 110 81.8
Gohir.D07G193200 Gossypium hirsutum HOM05D002897 ORTHO05D007570 5.0e-49 198.0 129 73.6
Gorai.001G216300 Gossypium raimondii HOM05D002897 ORTHO05D007570 5.0e-49 198.0 129 73.6
MD17G1102300 Malus domestica HOM05D002897 ORTHO05D007570 5.0e-49 198.0 110 82.7
Medtr1g086000 Medicago truncatula HOM05D002897 ORTHO05D007570 5.0e-49 198.0 109 81.7
Nn1g01968 Nelumbo nucifera HOM05D002897 ORTHO05D007570 6.5e-49 197.6 110 80.0
Nitab4.5_0000482g0100 Nicotiana tabacum HOM05D002897 ORTHO05D007570 8.5e-49 197.2 110 80.0
Nitab4.5_0003449g0090 Nicotiana tabacum HOM05D002897 ORTHO05D007570 8.5e-49 197.2 110 80.0
Peaxi162Scf00921g00013 Petunia axillaris HOM05D002897 ORTHO05D007570 8.5e-49 197.2 110 79.1
FvH4_6g42600 Fragaria vesca HOM05D002897 ORTHO05D007570 1.1e-48 196.8 110 80.9
Glyma.14G046700 Glycine max HOM05D002897 ORTHO05D007570 1.1e-48 196.8 109 80.7
LjContig00564g0007535 Lotus japonicus HOM05D002897 ORTHO05D007570 1.1e-48 196.8 109 78.9
LjContig00564g0010319 Lotus japonicus HOM05D002897 ORTHO05D007570 1.1e-48 196.8 109 78.9
CAN.G664.11 Capsicum annuum HOM05D002897 ORTHO05D007570 1.5e-48 196.4 144 64.6
Gohir.A07G186700 Gossypium hirsutum HOM05D002897 ORTHO05D007570 1.5e-48 196.4 109 82.6
GSVIVG01030485001 Vitis vinifera HOM05D002897 ORTHO05D007570 1.5e-48 196.4 143 64.3
Glyma.02G270400 Glycine max HOM05D002897 ORTHO05D007570 1.9e-48 196.1 109 81.7
Psat6g158840 Pisum sativum HOM05D002897 ORTHO05D007570 1.9e-48 196.1 123 73.2
HanXRQChr03g0075631 Helianthus annuus HOM05D002897 ORTHO05D007570 2.5e-48 195.7 105 80.0
CANSAT64G1239 Cannabis sativa HOM05D002897 ORTHO05D007570 4.2e-48 194.9 110 80.9
ECA240G2609 Erigeron canadensis HOM05D002897 ORTHO05D007570 4.2e-48 194.9 105 80.0
Potri.014G156900 Populus trichocarpa HOM05D002897 ORTHO05D007570 4.2e-48 194.9 146 66.4
Phvul.008G211600 Phaseolus vulgaris HOM05D002897 ORTHO05D007570 9.4e-48 193.7 110 79.1
Sabra14G0118700 Salix brachista HOM05D002897 ORTHO05D007570 9.4e-48 193.7 143 68.5
Rhsim06G0166200 Rhododendron simsii HOM05D002897 ORTHO05D007570 1.6e-47 193.0 161 59.0
Solyc07g049230.1 Solanum lycopersicum HOM05D002897 ORTHO05D007570 1.6e-47 193.0 126 69.0
Sopen07g025240 Solanum pennellii HOM05D002897 ORTHO05D007570 1.6e-47 193.0 126 69.0
DCAR_019749 Daucus carota HOM05D002897 ORTHO05D007570 3.6e-47 191.8 114 75.4
Lj1P779T15 Lonicera japonica HOM05D002897 ORTHO05D007570 8.0e-47 190.7 105 81.9
THA.LOC104826139 Tarenaya hassleriana HOM05D002897 ORTHO05D007570 1.0e-46 190.3 143 63.6
Manes.13G067600 Manihot esculenta HOM05D002897 ORTHO05D007570 1.4e-46 189.9 109 78.0
Manes.13G067625 Manihot esculenta HOM05D002897 ORTHO05D007570 1.4e-46 189.9 109 78.0
CDE12G0398 Ceratophyllum demersum HOM05D002897 ORTHO05D007570 1.8e-46 189.5 106 78.3
TPR.G31174 Trifolium pratense HOM05D002897 ORTHO05D007570 1.8e-46 189.5 124 72.6
CARHR126500 Cardamine hirsuta HOM05D002897 ORTHO05D007570 3.0e-46 188.7 110 76.4
AL4G28050 Arabidopsis lyrata HOM05D002897 ORTHO05D007570 4.0e-46 188.3 135 65.2
Carub.0004s1398 Capsella rubella HOM05D002897 ORTHO05D007570 5.2e-46 188.0 135 64.4
Thhalv10017400m.g Eutrema salsugineum HOM05D002897 ORTHO05D007570 5.2e-46 188.0 110 76.4
Sp4g14970 Schrenkiella parvula HOM05D002897 ORTHO05D007570 6.8e-46 187.6 135 64.4
Lalb_Chr10g0105691 Lupinus albus HOM05D002897 ORTHO05D007570 8.8e-46 187.2 109 78.0
AT2G32180 Arabidopsis thaliana HOM05D002897 ORTHO05D007570 1.2e-45 186.8 135 64.4
AT2G32650 Arabidopsis thaliana HOM05D002897 ORTHO05D007570 1.2e-45 186.8 135 64.4
Aa31LG5G4700 Aethionema arabicum HOM05D002897 ORTHO05D007570 2.0e-45 186.0 133 66.2
PGSC0003DMG400000672 Solanum tuberosum HOM05D002897 ORTHO05D007570 2.0e-45 186.0 125 66.4
vmacro12175 Vaccinium macrocarpon HOM05D002897 ORTHO05D007570 1.7e-44 183.0 121 67.8
BcaB02g10455 Brassica carinata HOM05D002897 ORTHO05D007570 3.7e-44 181.8 125 68.0
BolC4t27692H Brassica oleracea HOM05D002897 ORTHO05D007570 3.7e-44 181.8 133 65.4
BraA04t18016Z Brassica rapa HOM05D002897 ORTHO05D007570 4.8e-44 181.4 134 62.7
BcaB02g10485 Brassica carinata HOM05D002897 ORTHO05D007570 6.3e-44 181.0 105 77.1
BcaB06g28612 Brassica carinata HOM05D002897 ORTHO05D007570 6.3e-44 181.0 134 62.7
C04p17040 Brassica napus HOM05D002897 ORTHO05D007570 6.3e-44 181.0 140 62.1
C04p62130 Brassica napus HOM05D002897 ORTHO05D007570 6.3e-44 181.0 135 63.7
BolC4t23256H Brassica oleracea HOM05D002897 ORTHO05D007570 8.3e-44 180.6 134 63.4
TAR624G0083 Trochodendron aralioides HOM05D002897 ORTHO05D007570 8.3e-44 180.6 108 75.0
BcaC02g11346 Brassica carinata HOM05D002897 ORTHO05D007570 1.1e-43 180.3 134 63.4
A05p13340 Brassica napus HOM05D002897 ORTHO05D007570 1.4e-43 179.9 140 61.4
BcaC02g07907 Brassica carinata HOM05D002897 ORTHO05D007570 1.8e-43 179.5 105 77.1
A05p12950 Brassica napus HOM05D002897 ORTHO05D007570 1.8e-43 179.5 133 62.4
BraA05t20273Z Brassica rapa HOM05D002897 ORTHO05D007570 1.8e-43 179.5 134 62.7
BraA05t20235Z Brassica rapa HOM05D002897 ORTHO05D007570 3.1e-43 178.7 104 76.0
PSO566G0275 Papaver somniferum HOM05D002897 ORTHO05D007570 3.1e-43 178.7 120 70.0
PSO782G2696 Papaver somniferum HOM05D002897 ORTHO05D007570 9.1e-43 177.2 120 69.2
Aqoxy7G01529 Aquilegia oxysepala HOM05D002897 ORTHO05D007570 3.8e-41 171.8 106 74.5
ATR0829G043 Amborella trichopoda HOM05D002897 ORTHO05D007570 1.2e-37 160.2 111 64.9
A04p25050 Brassica napus HOM05D002897 ORTHO05D007570 1.5e-32 143.3 115 58.3
BolC4t23293H Brassica oleracea HOM05D002897 ORTHO05D007570 3.3e-32 142.1 110 60.0
Os02g0784900 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D007570 1.6e-31 139.8 108 61.1
Zm00001eb025350 Zea mays HOM05D002897 ORTHO05D007570 1.8e-30 136.3 108 58.3
FAN05G4540 Fragaria x ananassa HOM05D002897 ORTHO05D007570 5.2e-30 134.8 103 64.1
SEGI_35464 Sequoiadendron giganteum HOM05D002897 ORTHO05D007570 5.2e-30 134.8 143 49.0
FAN09G3117 Fragaria x ananassa HOM05D002897 ORTHO05D007570 2.4e-27 125.9 68 82.4
BcaC02g08731 Brassica carinata HOM05D002897 ORTHO05D007570 3.5e-26 122.1 119 53.8
SMO137G0344 Selaginella moellendorffii HOM05D002897 ORTHO05D007570 6.6e-25 117.9 102 51.0
Pp3c20_2790 Physcomitrium patens HOM05D002897 ORTHO05D007570 1.1e-22 110.5 103 48.5
BcaB06g28611 Brassica carinata HOM05D002897 ORTHO05D007570 3.1e-22 109.0 89 57.3
BcaB06g28610 Brassica carinata HOM05D002897 ORTHO05D007570 6.8e-22 107.8 60 80.0
Lalb_Chr04g0249921 Lupinus albus HOM05D002897 ORTHO05D007570 3.7e-20 102.1 106 50.9
Mapoly0068s0043 Marchantia polymorpha HOM05D002897 ORTHO05D007570 3.5e-18 95.5 105 44.8
CBR_g4877 Chara braunii HOM05D002897 ORTHO05D007570 1.0e-17 94.0 99 43.4
C04p17460 Brassica napus HOM05D002897 ORTHO05D007570 5.0e-17 91.7 88 51.1
BolC4t26713H Brassica oleracea HOM05D002897 ORTHO05D007570 2.6e-13 79.3 40 82.5
SMO358G0019 Selaginella moellendorffii HOM05D001682 ORTHO05D001625 1.9e-11 73.2 76 42.1
COL.COLO4_17397 Corchorus olitorius HOM05D001682 ORTHO05D001625 7.1e-11 71.2 116 32.8
AagrBONN_evm.TU.Sc2ySwM_368.1899 Anthoceros agrestis HOM05D002897 ORTHO05D007570 1.2e-10 70.5 56 53.6
Thecc.07G148100 Theobroma cacao HOM05D001682 ORTHO05D001625 1.2e-10 70.5 95 31.6
Duzib187G1083 Durio zibethinus HOM05D001682 ORTHO05D001625 3.5e-10 68.9 95 31.6
Medtr6g060170 Medicago truncatula HOM05D001682 ORTHO05D001625 1.3e-09 67.0 74 39.2
Pp3c9_3180 Physcomitrium patens HOM05D001682 ORTHO05D001625 1.3e-09 67.0 76 35.5
ATR1089G007 Amborella trichopoda HOM05D001682 ORTHO05D001625 2.3e-09 66.2 86 30.2
CBR_g2916 Chara braunii HOM05D001682 ORTHO05D001625 2.3e-09 66.2 79 38.0
Psat1g111880 Pisum sativum HOM05D001682 ORTHO05D001625 3.0e-09 65.9 74 37.8
CDE07G0853 Ceratophyllum demersum HOM05D001682 ORTHO05D001625 3.9e-09 65.5 110 29.1
Gohir.A08G233900 Gossypium hirsutum HOM05D001682 ORTHO05D001625 1.1e-08 63.9 82 35.4
PSO017G4107 Papaver somniferum HOM05D001682 ORTHO05D001625 1.9e-08 63.2 79 32.9
Gorai.004G271000 Gossypium raimondii HOM05D001682 ORTHO05D001625 2.5e-08 62.8 82 34.1
QL09p000914 Quercus lobata HOM05D001682 ORTHO05D001625 2.5e-08 62.8 74 33.8
CANSAT80G1848 Cannabis sativa HOM05D001682 ORTHO05D001625 3.3e-08 62.4 74 32.4
MBI03_g24411_MAGBIO Magnolia biondii HOM05D001682 ORTHO05D001625 4.3e-08 62.0 134 23.9
PSO170G0622 Papaver somniferum HOM05D001682 ORTHO05D001625 4.3e-08 62.0 79 32.9
PGR102G3195 Punica granatum HOM05D001682 ORTHO05D001625 5.6e-08 61.6 76 34.2
SEGI_19768 Sequoiadendron giganteum HOM05D001682 ORTHO05D001625 5.6e-08 61.6 92 31.5
Sc23g0005660 Simmondsia chinensis HOM05D001682 ORTHO05D001625 5.6e-08 61.6 74 32.4
EL10Ac2g03831 Beta vulgaris HOM05D001682 ORTHO05D001625 9.5e-08 60.8 92 28.3
Hund19440 Selenicereus undatus HOM05D001682 ORTHO05D001625 9.5e-08 60.8 74 33.8
TWI81G0894 Tripterygium wilfordii HOM05D001682 ORTHO05D001625 1.2e-07 60.5 74 32.4
GSVIVG01037105001 Vitis vinifera HOM05D001682 ORTHO05D001625 1.2e-07 60.5 82 32.9
Cfa008027 Carpinus fangiana HOM05D001682 ORTHO05D001625 1.6e-07 60.1 80 31.2
Gohir.D08G254100 Gossypium hirsutum HOM05D001682 ORTHO05D001625 1.6e-07 60.1 82 32.9
Lalb_Chr06g0168821 Lupinus albus HOM05D001682 ORTHO05D001625 1.6e-07 60.1 117 29.1
Nn5g27157 Nelumbo nucifera HOM05D001682 ORTHO05D001625 1.6e-07 60.1 100 28.0
Potri.013G089600 Populus trichocarpa HOM05D001682 ORTHO05D001625 1.6e-07 60.1 118 31.4
Sed0004544 Sechium edule HOM05D001682 ORTHO05D001625 2.1e-07 59.7 87 31.0
THA.LOC104815631 Tarenaya hassleriana HOM05D001682 ORTHO05D001625 2.1e-07 59.7 92 29.3
CiPaw.04G007400 Carya illinoinensis HOM05D001682 ORTHO05D001625 2.8e-07 59.3 74 31.1
Prupe.8G000800 Prunus persica HOM05D001682 ORTHO05D001625 3.6e-07 58.9 70 32.9
MD00G1089100 Malus domestica HOM05D001682 ORTHO05D001625 6.2e-07 58.2 70 34.3
SEGI_06368 Sequoiadendron giganteum HOM05D001682 ORTHO05D001625 6.2e-07 58.2 76 31.6
Aqoxy6G00022 Aquilegia oxysepala HOM05D001682 ORTHO05D001625 1.8e-06 56.6 102 25.5
Manes.17G002700 Manihot esculenta HOM05D001682 ORTHO05D001625 1.8e-06 56.6 74 31.1
Sed0002686 Sechium edule HOM05D001682 ORTHO05D001625 1.8e-06 56.6 75 33.3
unitig_32.g11137 Utricularia gibba HOM05D001682 ORTHO05D001625 1.8e-06 56.6 83 30.1
CAN.G582.5 Capsicum annuum HOM05D001682 ORTHO05D001625 2.4e-06 56.2 74 31.1
Cpa.g.sc21.233 Carica papaya HOM05D001682 ORTHO05D001625 3.1e-06 55.8 101 28.7
SalBow7G2699 Salvia bowleyana HOM05D001682 ORTHO05D001625 3.1e-06 55.8 74 29.7
Cc10_g16240 Coffea canephora HOM05D001682 ORTHO05D001625 5.2e-06 55.1 92 27.2
Lsat_1_v5_gn_4_132341 Lactuca sativa HOM05D001682 ORTHO05D001625 5.2e-06 55.1 74 31.1
PSO017G1554 Papaver somniferum HOM05D001682 ORTHO05D001625 5.2e-06 55.1 74 31.1
Nitab4.5_0000087g0100 Nicotiana tabacum HOM05D001682 ORTHO05D001625 6.8e-06 54.7 74 29.7
PSO017G2400 Papaver somniferum HOM05D001682 ORTHO05D001625 6.8e-06 54.7 74 31.1
PSO170G5969 Papaver somniferum HOM05D001682 ORTHO05D001625 6.8e-06 54.7 74 31.1
QL09p001016 Quercus lobata HOM05D001682 ORTHO05D001625 8.9e-06 54.3 74 27.0


User provided reference genes

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