Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 4.4e-218 761.1 424 100.0
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 1.0e-129 467.6 393 63.1
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 2.5e-128 463.0 381 64.8
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 9.4e-128 461.1 399 61.7
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 4.4e-125 452.2 393 63.1
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.3e-124 450.7 367 65.1
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 1.8e-123 446.8 389 62.5
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 2.4e-123 446.4 397 59.9
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 4.1e-123 445.7 393 62.1
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 2.0e-122 443.4 368 63.9
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 5.9e-122 441.8 381 62.7
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 5.0e-121 438.7 368 62.2
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 8.5e-121 438.0 368 62.0
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 1.9e-120 436.8 392 62.5
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 1.9e-120 436.8 397 60.7
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 1.9e-120 436.8 389 60.7
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 4.2e-120 435.6 380 61.8
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 9.4e-120 434.5 373 63.0
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 6.7e-118 428.3 398 58.8
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.6e-117 426.4 398 58.5
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 2.6e-117 426.4 385 59.5
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 4.4e-117 425.6 365 60.0
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 1.8e-115 420.2 390 56.2
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 1.8e-115 420.2 385 60.0
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 2.4e-115 419.9 399 56.9
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 4.1e-115 419.1 396 57.8
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.2e-114 417.5 441 54.4
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.2e-114 417.5 441 54.2
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 1.6e-114 417.2 377 58.6
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 2.7e-114 416.4 399 56.6
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 3.5e-114 416.0 370 61.1
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 1.0e-113 414.5 390 58.2
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 1.3e-113 414.1 396 57.8
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 2.2e-113 413.3 399 55.4
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 2.2e-113 413.3 400 56.8
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 3.2e-112 409.5 389 58.1
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 3.2e-112 409.5 406 55.2
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 2.1e-111 406.8 380 59.2
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.1e-111 406.8 367 60.8
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 2.7e-111 406.4 366 59.3
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 8.0e-111 404.8 370 57.6
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 1.0e-110 404.4 382 56.8
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 1.4e-110 404.1 380 58.9
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 1.4e-110 404.1 380 58.7
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.8e-110 403.7 376 59.0
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 1.2e-109 401.0 393 56.7
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 1.5e-109 400.6 380 58.4
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 1.5e-109 400.6 472 50.0
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 2.0e-109 400.2 391 54.7
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 3.4e-109 399.4 382 56.0
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 4.4e-109 399.1 413 55.0
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.3e-108 397.5 387 55.0
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 3.1e-107 392.9 377 56.2
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 3.1e-107 392.9 367 56.7
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 4.1e-107 392.5 401 54.6
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 4.1e-107 392.5 383 54.0
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 5.4e-107 392.1 397 54.4
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 7.0e-107 391.7 369 60.4
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 4.5e-106 389.0 393 55.0
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 5.9e-106 388.7 387 55.3
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 1.0e-105 387.9 368 55.2
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 1.3e-105 387.5 398 53.5
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.7e-105 387.1 380 55.8
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 2.3e-105 386.7 382 55.8
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.5e-104 383.3 313 64.5
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.0e-102 377.9 369 55.0
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 1.9e-96 357.1 331 57.1
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 4.1e-91 339.3 366 49.5
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 6.0e-90 335.5 392 53.1
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 8.6e-89 331.6 409 47.2
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 1.1e-83 314.7 402 49.3
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.1e-80 304.7 278 61.5
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 1.2e-79 301.2 382 48.4
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.1e-79 300.4 279 61.3
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 1.7e-76 290.8 375 42.9
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.5e-72 276.9 311 51.8
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 5.6e-72 275.8 298 51.7
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 7.6e-69 265.4 260 53.8
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.3e-68 264.6 264 50.8
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 1.1e-67 261.5 205 66.3
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 5.8e-61 239.2 344 43.9
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 1.7e-60 237.7 354 43.8
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 1.6e-50 204.5 377 34.2
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 4.6e-50 203.0 168 60.7
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 4.6e-50 203.0 376 38.3
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 6.9e-46 189.1 143 69.2
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 1.0e-41 175.3 234 42.7
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 9.6e-40 168.7 311 33.8
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 4.2e-35 153.3 295 35.3
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 7.9e-34 149.1 207 46.9
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 4.1e-30 136.7 298 33.2
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 8.8e-25 119.0 109 56.9
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 1.1e-22 112.1 71 80.3
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 2.4e-22 110.9 95 56.8
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.5e-19 100.9 100 56.0
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 4.8e-15 86.7 66 65.2


User provided reference genes

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