Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 6.2e-34 146.7 67 100.0
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 6.6e-28 126.7 67 86.6
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 9.6e-27 122.9 57 94.7
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 9.6e-27 122.9 67 82.1
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 9.6e-27 122.9 65 87.7
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 1.6e-26 122.1 67 82.1
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 1.6e-26 122.1 61 88.5
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 2.8e-26 121.3 63 82.5
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 4.8e-26 120.6 63 85.7
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.8e-26 120.6 63 85.7
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.8e-26 120.6 63 85.7
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.8e-26 120.6 63 85.7
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.8e-26 120.6 63 85.7
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 4.8e-26 120.6 63 85.7
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 4.8e-26 120.6 63 85.7
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 8.1e-26 119.8 58 89.7
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 1.8e-25 118.6 62 87.1
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 1.8e-25 118.6 62 88.7
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 2.4e-25 118.2 61 85.2
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 9.0e-25 116.3 63 85.7
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 1.2e-24 115.9 62 82.3
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.5e-24 115.5 63 82.5
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 3.4e-24 114.4 63 79.4
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 4.5e-24 114.0 63 81.0
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 4.5e-24 114.0 57 87.7
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 7.6e-24 113.2 63 79.4
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 7.6e-24 113.2 62 80.6
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 7.6e-24 113.2 62 80.6
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 7.6e-24 113.2 62 80.6
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 9.9e-24 112.8 62 79.0
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 9.9e-24 112.8 58 86.2
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 9.9e-24 112.8 58 86.2
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 9.9e-24 112.8 63 76.2
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.3e-23 112.5 63 79.4
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 2.2e-23 111.7 60 83.3
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 2.9e-23 111.3 67 76.1
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 4.9e-23 110.5 63 77.8
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 4.9e-23 110.5 63 77.8
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 4.9e-23 110.5 58 86.2
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 6.4e-23 110.2 63 76.2
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 6.4e-23 110.2 62 79.0
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 6.4e-23 110.2 62 79.0
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 8.4e-23 109.8 63 76.2
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 8.4e-23 109.8 67 74.6
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 1.1e-22 109.4 67 76.1
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 1.1e-22 109.4 58 82.8
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.4e-22 109.0 63 79.4
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.4e-22 109.0 63 79.4
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 79.0
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 79.0
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 79.0
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 79.0
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 79.0
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 1.4e-22 109.0 58 84.5
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.4e-22 108.2 62 77.4
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 2.4e-22 108.2 58 82.8
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 2.4e-22 108.2 58 82.8
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 2.4e-22 108.2 58 82.8
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 2.4e-22 108.2 62 77.4
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 3.2e-22 107.8 62 77.4
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 3.2e-22 107.8 62 77.4
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 3.2e-22 107.8 62 77.4
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 3.2e-22 107.8 62 77.4
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 3.2e-22 107.8 58 82.8
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 3.2e-22 107.8 58 82.8
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 4.2e-22 107.5 63 76.2
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 4.2e-22 107.5 62 77.4
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 5.4e-22 107.1 62 77.4
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 7.1e-22 106.7 58 81.0
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 7.1e-22 106.7 58 81.0
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 7.1e-22 106.7 63 74.6
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 1.2e-21 105.9 58 81.0
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 1.2e-21 105.9 58 81.0
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 1.2e-21 105.9 59 78.0
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.6e-21 105.5 62 75.8
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 2.1e-21 105.1 55 89.1
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 2.7e-21 104.8 56 80.4
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 3.5e-21 104.4 62 74.2
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 3.5e-21 104.4 55 85.5
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 4.6e-21 104.0 58 79.3
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.3e-20 102.4 61 75.4
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.3e-20 102.4 61 75.4
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 2.3e-20 101.7 60 75.0
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 3.0e-20 101.3 58 75.9
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 3.0e-20 101.3 53 84.9
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 3.9e-20 100.9 64 75.0
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 5.6e-19 97.1 53 81.1
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 2.4e-17 91.7 63 60.3
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 4.0e-17 90.9 63 65.1
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 1.2e-16 89.4 62 66.1
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 7.6e-16 86.7 63 68.3
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.3e-15 85.9 58 70.7
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.3e-15 85.9 63 65.1
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 6.4e-15 83.6 47 78.7
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 1.9e-14 82.0 48 77.1
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 2.8e-10 68.2 38 78.9
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 6.2e-10 67.0 36 83.3
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 6.2e-10 67.0 65 46.2
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 6.2e-10 67.0 65 46.2
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 8.2e-10 66.6 54 53.7
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.1e-09 66.2 36 83.3
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.4e-09 65.9 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.4e-09 65.9 36 83.3
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 1.2e-08 62.8 36 77.8
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 3.4e-08 61.2 53 49.1
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 1.0e-07 59.7 35 71.4


User provided reference genes

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