Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 1.5e-159 566.2 305 100.0
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.7e-54 217.2 278 46.4
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 3.8e-54 216.1 275 45.8
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 1.2e-52 211.1 267 46.4
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.3e-51 207.6 271 47.6
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 3.1e-48 196.4 274 47.4
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 2.7e-44 183.3 254 46.1
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 2.3e-43 180.3 246 45.9
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 1.9e-42 177.2 241 46.9
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 5.7e-42 175.6 282 43.6
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 4.1e-40 169.5 250 44.4
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 1.0e-38 164.9 256 43.4
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 1.7e-38 164.1 238 43.7
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 1.7e-38 164.1 231 43.7
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 2.2e-38 163.7 264 42.8
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 2.9e-38 163.3 238 46.6
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 3.8e-38 162.9 313 39.6
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.9e-37 160.6 280 40.7
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 5.5e-37 159.1 259 42.1
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 9.4e-37 158.3 325 38.5
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 9.4e-37 158.3 274 40.1
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.6e-36 157.5 243 44.4
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.1e-36 157.1 243 43.6
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 4.6e-36 156.0 237 42.2
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.0e-35 154.8 242 45.0
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 1.8e-35 154.1 306 40.5
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 3.0e-35 153.3 246 41.9
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 2.0e-34 150.6 250 42.4
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 5.7e-34 149.1 252 41.7
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 5.7e-34 149.1 252 41.7
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 7.4e-34 148.7 229 43.7
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.7e-33 147.5 306 37.6
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 4.8e-33 146.0 257 40.5
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.1e-32 144.8 248 41.9
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 1.8e-32 144.1 211 45.0
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 4.1e-32 142.9 239 43.1
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 5.3e-32 142.5 293 38.9
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 9.1e-32 141.7 316 35.1
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 5.9e-31 139.0 283 37.1
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 2.2e-30 137.1 207 44.4
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 5.0e-30 136.0 365 33.2
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 8.5e-30 135.2 271 39.5
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 1.1e-29 134.8 241 41.1
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 2.5e-29 133.7 269 35.3
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 1.2e-28 131.3 224 38.8
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.7e-28 130.2 221 41.6
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 2.7e-28 130.2 243 39.5
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 6.1e-28 129.0 230 43.0
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 6.1e-28 129.0 208 41.3
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 8.0e-28 128.6 285 35.1
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.4e-27 127.9 196 43.4
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 1.4e-27 127.9 241 40.2
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.8e-27 127.5 236 40.3
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 2.3e-27 127.1 246 39.8
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 3.9e-27 126.3 246 39.4
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 3.9e-27 126.3 246 39.4
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 5.2e-27 125.9 246 39.8
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 5.2e-27 125.9 255 37.3
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 1.5e-26 124.4 213 41.3
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 1.5e-26 124.4 210 42.4
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 1.5e-26 124.4 255 38.0
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 2.0e-26 124.0 266 38.7
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 5.7e-26 122.5 336 33.6
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 1.3e-25 121.3 255 39.6
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 2.2e-25 120.6 192 40.6
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 2.2e-25 120.6 254 37.4
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 6.3e-25 119.0 271 37.6
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 6.3e-25 119.0 271 37.6
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 6.3e-25 119.0 243 39.1
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 1.1e-24 118.2 289 34.6
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.8e-24 117.5 260 36.5
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 5.3e-24 115.9 194 41.8
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 7.0e-24 115.5 177 45.2
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 9.1e-24 115.2 236 39.0
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 2.6e-23 113.6 194 38.7
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 3.5e-23 113.2 247 38.1
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 7.7e-23 112.1 194 45.4
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 2.2e-22 110.5 266 36.8
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 2.2e-22 110.5 308 33.1
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 8.5e-22 108.6 261 36.0
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 1.6e-20 104.4 255 33.3
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 2.1e-20 104.0 174 45.4
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 2.7e-20 103.6 323 31.3
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 3.6e-20 103.2 355 30.1
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 1.8e-19 100.9 202 39.1
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 2.3e-19 100.5 174 44.8
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 8.8e-19 98.6 248 37.1
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 1.5e-18 97.8 328 31.1
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 2.6e-18 97.1 277 34.3
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 1.4e-16 91.3 162 40.1
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 5.3e-16 89.4 203 36.9
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.7e-14 84.3 261 31.0
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.5e-13 81.3 242 31.8
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.5e-13 81.3 230 31.3
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 5.5e-13 79.3 276 28.3
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 9.4e-13 78.6 223 31.4
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 1.6e-12 77.8 99 43.4
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 6.8e-11 72.4 109 40.4
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 1.5e-10 71.2 63 52.4
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 9.8e-10 68.6 58 56.9
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 1.3e-09 68.2 64 62.5
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 1.7e-09 67.8 298 25.8
BolC3t14925H Brassica oleracea HOM05D006830 ORTHO05D008119 1.4e-08 64.7 137 38.0
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 2.4e-08 63.9 209 29.7
ATR1127G221 Amborella trichopoda HOM05D006830 ORTHO05D008119 3.8e-06 56.6 119 35.3


User provided reference genes

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