Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0006970 Simmondsia chinensis HOM05D007999 ORTHO05D000248 2.1e-56 222.2 122 100.0
TAR636G2047 Trochodendron aralioides HOM05D007999 ORTHO05D000248 1.5e-14 83.2 116 47.4
TAR267G0002 Trochodendron aralioides HOM05D007999 ORTHO05D000248 7.6e-14 80.9 116 46.6
Manes.09G117900 Manihot esculenta HOM05D007999 ORTHO05D000248 1.3e-13 80.1 123 47.2
Haze_21176 Corylus avellana HOM05D007999 ORTHO05D000248 6.4e-13 77.8 122 43.4
Thecc.04G151500 Theobroma cacao HOM05D007999 ORTHO05D000248 6.4e-13 77.8 117 44.4
CiPaw.09G221400 Carya illinoinensis HOM05D007999 ORTHO05D000248 8.4e-13 77.4 116 42.2
Cfa017033 Carpinus fangiana HOM05D007999 ORTHO05D000248 1.9e-12 76.3 122 43.4
Sabra04G0153500 Salix brachista HOM05D007999 ORTHO05D000248 1.9e-12 76.3 128 40.6
Gohir.A03G087400 Gossypium hirsutum HOM05D007999 ORTHO05D000248 4.2e-12 75.1 120 42.5
Gohir.D02G108100 Gossypium hirsutum HOM05D007999 ORTHO05D000248 4.2e-12 75.1 120 42.5
VMungo0331G0380 Vigna mungo HOM05D007999 ORTHO05D000248 5.4e-12 74.7 120 40.0
Glyma.03G034300 Glycine max HOM05D007999 ORTHO05D000248 7.1e-12 74.3 120 40.8
Phvul.010G070300 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 1.2e-11 73.6 121 41.3
Potri.016G136800 Populus trichocarpa HOM05D007999 ORTHO05D000248 1.2e-11 73.6 131 40.5
Hma1.2p1_0537F.1_g174340 Hydrangea macrophylla HOM05D007999 ORTHO05D000248 3.5e-11 72.0 121 47.1
Migut.J00037 Erythranthe guttata HOM05D007999 ORTHO05D000248 4.6e-11 71.6 127 40.9
Cpa.g.sc86.58 Carica papaya HOM05D007999 ORTHO05D000248 1.0e-10 70.5 117 39.3
Lj3g0012389 Lotus japonicus HOM05D007999 ORTHO05D000248 1.3e-10 70.1 123 42.3
Oeu060433.1 Olea europaea HOM05D007999 ORTHO05D000248 1.3e-10 70.1 113 46.9
Lalb_Chr07g0190371 Lupinus albus HOM05D007999 ORTHO05D000248 1.8e-10 69.7 102 42.2
Actinidia11508 Actinidia chinensis HOM05D007999 ORTHO05D000248 2.3e-10 69.3 120 40.8
Glyma.01G133200 Glycine max HOM05D007999 ORTHO05D000248 2.3e-10 69.3 121 39.7
Gorai.005G122700 Gossypium raimondii HOM05D007999 ORTHO05D000248 3.0e-10 68.9 120 40.0
Ah.08g209300 Amaranthus hybridus HOM05D007999 ORTHO05D000248 5.1e-10 68.2 109 42.2
Nn2g10298 Nelumbo nucifera HOM05D007999 ORTHO05D000248 6.7e-10 67.8 105 41.0
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 8.7e-10 67.4 130 40.8
Nitab4.5_0000048g0020 Nicotiana tabacum HOM05D007999 ORTHO05D000248 1.1e-09 67.0 125 36.0
QL07p032111 Quercus lobata HOM05D007999 ORTHO05D000248 1.5e-09 66.6 125 38.4
FAN02G1196 Fragaria x ananassa HOM05D007999 ORTHO05D000248 2.5e-09 65.9 130 37.7
FvH4_6g09860 Fragaria vesca HOM05D007999 ORTHO05D000248 3.3e-09 65.5 126 38.1
Rhsim05G0230600 Rhododendron simsii HOM05D007999 ORTHO05D000248 3.3e-09 65.5 126 40.5
SalBow8G1753 Salvia bowleyana HOM05D007999 ORTHO05D000248 3.3e-09 65.5 101 43.6
Medtr7g073270 Medicago truncatula HOM05D007999 ORTHO05D000248 4.3e-09 65.1 108 43.5
Ca_26988_v3 Cicer arietinum L. HOM05D007999 ORTHO05D000248 5.6e-09 64.7 118 40.7
Psat7g234760 Pisum sativum HOM05D007999 ORTHO05D000248 7.4e-09 64.3 123 39.0
MSTRG.5499 Avicennia marina HOM05D007999 ORTHO05D000248 9.6e-09 63.9 118 38.1
Dinv25344 Davidia involucrata HOM05D007999 ORTHO05D000248 1.6e-08 63.2 105 43.8
Nitab4.5_0004433g0050 Nicotiana tabacum HOM05D007999 ORTHO05D000248 1.6e-08 63.2 124 36.3
TPR.G14122 Trifolium pratense HOM05D007999 ORTHO05D000248 2.1e-08 62.8 110 38.2
ClCG10G022740 Citrullus lanatus HOM05D007999 ORTHO05D000248 6.2e-08 61.2 118 38.1
Prupe.6G293700 Prunus persica HOM05D007999 ORTHO05D000248 8.1e-08 60.8 130 37.7
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 1.1e-07 60.5 130 39.2
Lsat_1_v5_gn_8_107720 Lactuca sativa HOM05D007999 ORTHO05D000248 1.1e-07 60.5 124 41.9
Aqoxy4G02427 Aquilegia oxysepala HOM05D007999 ORTHO05D000248 1.8e-07 59.7 105 39.0
Ciclev10013035m.g Citrus clementina HOM05D007999 ORTHO05D000248 1.8e-07 59.7 132 38.6
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.8e-07 59.7 111 37.8
Solyc09g042230.2 Solanum lycopersicum HOM05D007999 ORTHO05D000248 4.0e-07 58.5 117 40.2
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 5.3e-07 58.2 126 39.7
Sopen09g015370 Solanum pennellii HOM05D007999 ORTHO05D000248 9.0e-07 57.4 105 41.9
Medtr4g028110 Medicago truncatula HOM05D007999 ORTHO05D000248 1.2e-06 57.0 122 36.1
Psat3g118800 Pisum sativum HOM05D007999 ORTHO05D000248 2.0e-06 56.2 106 36.8
Gohir.A10G150800 Gossypium hirsutum HOM05D007999 ORTHO05D000248 3.4e-06 55.5 100 38.0
Gohir.D10G115500 Gossypium hirsutum HOM05D007999 ORTHO05D000248 3.4e-06 55.5 100 38.0
Gorai.011G127200 Gossypium raimondii HOM05D007999 ORTHO05D000248 3.4e-06 55.5 100 38.0
RcHm_v2.0_Chr3g0460461 Rosa chinensis HOM05D007999 ORTHO05D000248 3.4e-06 55.5 124 36.3
PGSC0003DMG400031466 Solanum tuberosum HOM05D007999 ORTHO05D000248 4.5e-06 55.1 120 40.0
Oeu060213.1 Olea europaea HOM05D007999 ORTHO05D000248 7.6e-06 54.3 44 68.2


User provided reference genes

Program Settings