Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 8.0e-183 643.7 333 100.0
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 3.0e-161 572.0 333 88.6
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 2.2e-140 502.7 329 77.2
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 3.8e-140 501.9 329 78.4
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 3.8e-140 501.9 329 78.4
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 1.4e-139 500.0 333 76.9
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.6e-138 496.5 333 76.0
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 2.1e-138 496.1 333 76.3
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.8e-137 493.0 330 75.8
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 3.0e-137 492.3 328 73.8
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 3.0e-137 492.3 328 73.8
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 3.0e-137 492.3 333 75.7
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 3.9e-137 491.9 329 76.6
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 5.1e-137 491.5 329 76.3
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 6.7e-137 491.1 328 76.8
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 8.7e-137 490.7 328 75.3
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.1e-136 490.3 331 76.1
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 2.5e-136 489.2 333 75.4
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 3.3e-136 488.8 331 75.8
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 3.3e-136 488.8 334 74.3
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 7.4e-136 487.6 328 76.2
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 7.4e-136 487.6 326 74.8
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 9.6e-136 487.3 333 75.1
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 9.6e-136 487.3 329 75.7
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 9.6e-136 487.3 329 75.1
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 1.3e-135 486.9 333 74.2
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.6e-135 486.5 333 73.6
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 2.8e-135 485.7 329 74.8
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 3.7e-135 485.3 330 75.2
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 4.8e-135 485.0 330 76.4
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 8.1e-135 484.2 331 74.3
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.4e-134 482.6 334 73.4
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 2.4e-134 482.6 333 73.0
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 3.1e-134 482.3 329 75.4
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 4.0e-134 481.9 334 73.4
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 4.0e-134 481.9 329 74.2
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 6.9e-134 481.1 330 73.9
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 6.9e-134 481.1 333 75.7
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 1.2e-133 480.3 330 75.2
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 1.5e-133 479.9 333 72.7
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 4.5e-133 478.4 333 74.8
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 4.5e-133 478.4 330 73.0
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 5.8e-133 478.0 323 75.2
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 5.8e-133 478.0 334 73.1
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 5.8e-133 478.0 328 73.2
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 1.3e-132 476.9 331 73.4
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.2e-132 476.1 334 72.8
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 3.8e-132 475.3 330 73.6
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 4.9e-132 474.9 312 76.6
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 6.4e-132 474.6 328 72.3
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 3.2e-131 472.2 329 70.5
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 4.2e-131 471.9 330 73.0
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 9.3e-131 470.7 327 71.6
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 1.6e-130 469.9 324 75.3
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 2.7e-130 469.2 334 71.3
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 4.6e-130 468.4 331 72.2
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 2.3e-129 466.1 328 73.2
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 3.9e-129 465.3 328 71.3
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 3.9e-129 465.3 329 72.6
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 3.9e-129 465.3 321 72.9
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 3.3e-128 462.2 328 72.3
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 3.3e-128 462.2 329 71.4
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 4.3e-128 461.8 317 73.5
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 5.6e-128 461.5 317 72.2
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 5.6e-128 461.5 317 72.2
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 5.6e-128 461.5 303 76.2
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 9.6e-128 460.7 327 74.0
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 3.7e-127 458.8 319 73.7
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 6.2e-127 458.0 329 70.2
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 8.2e-127 457.6 328 69.2
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 1.4e-126 456.8 328 69.2
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.4e-126 456.8 319 71.5
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.4e-126 456.8 319 71.5
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.4e-126 456.8 329 69.9
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 2.4e-126 456.1 331 70.1
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 3.1e-126 455.7 333 69.1
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 6.9e-126 454.5 329 69.0
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 9.0e-126 454.1 331 70.4
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.5e-125 453.4 312 72.8
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 2.0e-125 453.0 317 72.6
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 7.6e-125 451.1 312 72.8
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 1.7e-124 449.9 309 72.5
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 3.8e-124 448.7 327 69.4
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 8.4e-124 447.6 328 68.0
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 1.4e-123 446.8 328 68.0
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 2.5e-123 446.0 328 68.0
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 3.2e-123 445.7 320 69.7
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 3.2e-123 445.7 317 72.2
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 3.2e-123 445.7 328 68.3
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 5.5e-123 444.9 321 68.5
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 7.1e-123 444.5 328 68.0
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 9.3e-123 444.1 329 66.9
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 2.7e-122 442.6 321 67.9
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 3.5e-122 442.2 330 66.7
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.3e-120 435.6 281 80.8
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 3.3e-120 435.6 318 68.2
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 1.3e-119 433.7 319 67.7
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.2e-119 433.0 330 66.1
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.8e-119 431.8 330 65.8
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 3.1e-118 429.1 278 79.9
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 5.9e-117 424.9 330 65.2
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.8e-116 422.2 333 67.6
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 3.2e-115 419.1 326 64.7
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 2.7e-114 416.0 307 66.4
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 2.3e-113 412.9 275 75.6
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 1.8e-110 403.3 319 62.4
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 2.4e-110 402.9 330 65.8
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 9.1e-110 401.0 331 65.6
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 1.9e-107 393.3 315 61.9
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 1.4e-105 387.1 315 61.3
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 1.9e-99 366.7 254 71.3
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 2.7e-98 362.8 329 60.2
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 1.0e-97 360.9 233 79.8
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 1.7e-95 353.6 321 55.5
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 1.1e-94 350.9 329 58.7
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 1.4e-94 350.5 316 53.8
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 7.7e-93 344.7 318 56.0
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 2.7e-90 336.3 317 54.6
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 5.2e-89 332.0 240 71.7
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 1.4e-86 323.9 313 52.1
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 5.9e-85 318.5 292 63.0
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 1.0e-73 281.2 329 47.1
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 4.9e-71 272.3 323 44.3
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 8.1e-34 148.7 323 31.3
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 7.1e-22 109.0 80 76.2
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 7.9e-21 105.5 264 28.8
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 3.9e-12 76.6 99 45.5
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 2.9e-07 60.5 124 31.5


User provided reference genes

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