Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 1.5e-55 219.2 102 100.0
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.6e-39 165.2 86 84.9
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.7e-38 162.5 86 83.7
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.8e-38 161.0 87 80.5
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 6.3e-38 160.6 86 82.6
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 1.1e-37 159.8 86 82.6
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.4e-37 159.5 86 81.4
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.4e-37 159.5 86 81.4
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 2.4e-37 158.7 86 82.6
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 4.1e-37 157.9 87 81.6
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 4.1e-37 157.9 87 81.6
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 4.1e-37 157.9 86 80.2
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 5.3e-37 157.5 86 82.6
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 5.3e-37 157.5 88 81.8
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 7.0e-37 157.1 86 80.2
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 7.0e-37 157.1 86 80.2
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 7.0e-37 157.1 86 80.2
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.0e-37 157.1 86 80.2
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 9.1e-37 156.8 88 81.8
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 9.1e-37 156.8 88 81.8
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 9.1e-37 156.8 88 81.8
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 9.1e-37 156.8 88 81.8
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 9.1e-37 156.8 86 79.1
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.2e-36 156.4 86 77.9
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 1.6e-36 156.0 86 80.2
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.6e-36 156.0 86 80.2
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 3.5e-36 154.8 86 81.4
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.5e-36 154.5 88 80.7
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 4.5e-36 154.5 86 77.9
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 4.5e-36 154.5 86 77.9
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 7.7e-36 153.7 86 76.7
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 7.7e-36 153.7 86 79.1
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 7.7e-36 153.7 86 77.9
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.0e-35 153.3 86 77.9
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.3e-35 152.9 86 77.9
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.3e-35 152.9 86 75.6
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 1.7e-35 152.5 86 75.6
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.7e-35 152.5 86 75.6
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 2.9e-35 151.8 86 75.6
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 3.8e-35 151.4 88 75.0
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 3.8e-35 151.4 86 79.1
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 8.5e-35 150.2 89 78.7
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 8.5e-35 150.2 86 75.6
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.1e-34 149.8 103 68.0
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.5e-34 149.4 84 78.6
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 1.9e-34 149.1 86 77.9
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 1.9e-34 149.1 86 75.6
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 1.9e-34 149.1 86 76.7
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 2.5e-34 148.7 86 76.7
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 4.2e-34 147.9 93 74.2
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 5.5e-34 147.5 86 76.7
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 5.5e-34 147.5 86 75.6
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 5.5e-34 147.5 84 77.4
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 7.2e-34 147.1 86 76.7
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 7.2e-34 147.1 89 77.5
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 9.4e-34 146.7 86 75.6
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 9.4e-34 146.7 86 76.7
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 3.6e-33 144.8 86 74.4
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 4.7e-33 144.4 86 76.7
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 6.1e-33 144.1 84 73.8
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 6.1e-33 144.1 86 76.7
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 6.1e-33 144.1 89 78.7
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 1.4e-32 142.9 99 68.7
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 2.3e-32 142.1 87 73.6
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 5.2e-32 141.0 84 73.8
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 3.4e-31 138.3 100 65.0
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 3.4e-31 138.3 86 70.9
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 4.4e-31 137.9 91 69.2
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 5.7e-31 137.5 84 71.4
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 7.5e-31 137.1 91 69.2
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 1.3e-30 136.3 86 72.1
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.4e-29 132.9 100 66.0
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 1.8e-29 132.5 84 67.9
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 3.1e-29 131.7 84 69.0
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 4.1e-29 131.3 84 67.9
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 4.1e-29 131.3 86 69.8
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 7.0e-29 130.6 84 67.9
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-28 129.8 84 67.9
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-28 129.8 84 67.9
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.2e-28 129.8 84 67.9
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.2e-28 129.8 84 67.9
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 2.0e-28 129.0 84 67.9
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 2.7e-28 128.6 84 66.7
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 2.7e-28 128.6 84 66.7
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 2.7e-28 128.6 84 66.7
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 2.7e-28 128.6 84 66.7
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 2.7e-28 128.6 84 66.7
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 2.7e-28 128.6 84 66.7
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 2.7e-28 128.6 84 66.7
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.0e-27 126.7 84 65.5
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.7e-27 125.9 84 64.3
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 2.8e-25 118.6 86 68.6
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 1.0e-24 116.7 85 63.5
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 5.2e-24 114.4 65 73.8
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 9.8e-23 110.2 100 57.0
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 2.8e-22 108.6 57 80.7
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 8.3e-22 107.1 57 80.7
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.1e-21 106.7 84 59.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.1e-21 106.7 85 58.8
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.4e-21 105.5 66 69.7
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.4e-21 105.5 66 69.7
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 5.4e-21 104.4 55 81.8
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 2.0e-20 102.4 57 77.2
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 2.0e-20 102.4 58 74.1
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 3.5e-20 101.7 85 52.9
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 4.5e-20 101.3 55 78.2
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 5.9e-20 100.9 55 78.2
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 5.0e-19 97.8 66 63.6
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 4.3e-18 94.7 45 91.1
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 7.3e-18 94.0 55 74.5
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 5.2e-16 87.8 57 71.9
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 8.9e-16 87.0 55 67.3
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.5e-15 86.3 40 90.0
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 2.0e-15 85.9 55 67.3
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 3.4e-15 85.1 55 60.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 7.8e-12 73.9 37 78.4
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 3.6e-09 65.1 30 90.0
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 7.5e-07 57.4 79 32.9
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 4.9e-06 54.7 65 52.3


User provided reference genes

Program Settings