Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 4.0e-30 134.0 65 100.0
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 6.4e-28 126.7 63 96.8
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 8.4e-28 126.3 63 96.8
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 8.4e-28 126.3 63 96.8
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.1e-27 125.9 63 96.8
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.1e-27 125.9 63 96.8
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.1e-27 125.9 63 96.8
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.1e-27 125.9 65 90.8
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 1.4e-27 125.6 63 95.2
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.9e-27 125.2 63 95.2
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.9e-27 125.2 63 95.2
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 1.9e-27 125.2 63 95.2
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 1.9e-27 125.2 63 95.2
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.9e-27 125.2 63 95.2
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 3.2e-27 124.4 63 95.2
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 3.2e-27 124.4 62 93.5
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 3.2e-27 124.4 62 93.5
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 4.2e-27 124.0 63 93.7
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 4.2e-27 124.0 62 91.9
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 5.5e-27 123.6 63 93.7
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 5.5e-27 123.6 63 93.7
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 5.5e-27 123.6 63 93.7
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 5.5e-27 123.6 63 93.7
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 5.5e-27 123.6 63 93.7
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 5.5e-27 123.6 62 95.2
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 5.5e-27 123.6 63 93.7
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 5.5e-27 123.6 63 93.7
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 9.3e-27 122.9 63 93.7
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 9.3e-27 122.9 63 93.7
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 9.3e-27 122.9 63 93.7
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 9.3e-27 122.9 63 93.7
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 9.3e-27 122.9 63 93.7
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 1.2e-26 122.5 63 92.1
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 1.2e-26 122.5 63 93.7
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 1.2e-26 122.5 64 90.6
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 1.2e-26 122.5 63 92.1
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 1.6e-26 122.1 63 92.1
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 1.6e-26 122.1 63 92.1
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 1.6e-26 122.1 63 92.1
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 1.6e-26 122.1 63 92.1
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.1e-26 121.7 63 92.1
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.1e-26 121.7 63 92.1
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 2.1e-26 121.7 63 92.1
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 2.1e-26 121.7 63 92.1
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 2.7e-26 121.3 62 93.5
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 2.7e-26 121.3 63 90.5
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 4.6e-26 120.6 63 90.5
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 4.6e-26 120.6 63 90.5
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 4.6e-26 120.6 63 90.5
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 4.6e-26 120.6 63 90.5
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 6.0e-26 120.2 63 90.5
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 6.0e-26 120.2 63 90.5
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 7.9e-26 119.8 63 88.9
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 7.9e-26 119.8 63 90.5
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 1.0e-25 119.4 63 88.9
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 1.0e-25 119.4 63 88.9
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 1.0e-25 119.4 62 88.7
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 1.0e-25 119.4 62 88.7
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 1.0e-25 119.4 62 88.7
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 1.0e-25 119.4 63 88.9
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 1.0e-25 119.4 63 90.5
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 1.3e-25 119.0 63 88.9
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 1.3e-25 119.0 63 88.9
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 1.3e-25 119.0 63 88.9
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.3e-25 119.0 63 90.5
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.3e-25 119.0 63 88.9
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 1.8e-25 118.6 63 88.9
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 1.8e-25 118.6 63 88.9
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 1.8e-25 118.6 63 88.9
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 1.8e-25 118.6 63 88.9
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 1.8e-25 118.6 63 90.5
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.8e-25 118.6 63 88.9
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 1.8e-25 118.6 62 90.3
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.3e-25 118.2 63 88.9
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 2.3e-25 118.2 63 88.9
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 2.3e-25 118.2 63 88.9
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 2.3e-25 118.2 63 88.9
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 2.3e-25 118.2 63 88.9
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 3.0e-25 117.9 62 88.7
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 3.9e-25 117.5 63 88.9
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 5.1e-25 117.1 63 87.3
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 6.7e-25 116.7 62 87.1
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 6.7e-25 116.7 62 87.1
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 6.7e-25 116.7 62 87.1
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 6.7e-25 116.7 62 87.1
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 6.7e-25 116.7 62 87.1
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 8.7e-25 116.3 63 87.3
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 8.7e-25 116.3 63 87.3
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 8.7e-25 116.3 63 87.3
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 1.9e-24 115.2 63 84.1
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.9e-24 115.2 63 87.3
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 2.5e-24 114.8 63 84.1
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 2.5e-24 114.8 63 84.1
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.5e-24 114.8 63 85.7
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 2.5e-24 114.8 63 85.7
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 3.3e-24 114.4 63 85.7
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 4.3e-24 114.0 63 90.5
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 4.3e-24 114.0 63 88.9
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 5.6e-24 113.6 61 86.9
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 5.6e-24 113.6 63 87.3
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 5.6e-24 113.6 63 85.7
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 7.4e-24 113.2 63 87.3
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 7.4e-24 113.2 63 84.1
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 9.6e-24 112.8 63 87.3
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 9.6e-24 112.8 63 85.7
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 9.6e-24 112.8 63 85.7
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 9.6e-24 112.8 63 85.7
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 9.6e-24 112.8 63 85.7
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 1.3e-23 112.5 62 83.9
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 1.3e-23 112.5 62 83.9
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 1.6e-23 112.1 63 87.3
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 1.6e-23 112.1 63 87.3
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-23 112.1 63 84.1
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-23 112.1 63 84.1
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.6e-23 112.1 63 87.3
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.6e-23 112.1 63 84.1
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 1.6e-23 112.1 63 87.3
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 2.8e-23 111.3 63 84.1
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.8e-23 111.3 63 84.1
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.7e-23 110.9 63 85.7
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.7e-23 110.9 63 84.1
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 3.7e-23 110.9 63 84.1
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 4.8e-23 110.5 63 82.5
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 6.2e-23 110.2 63 84.1
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 6.2e-23 110.2 63 84.1
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 6.2e-23 110.2 63 85.7
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 8.1e-23 109.8 63 82.5
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 8.1e-23 109.8 63 82.5
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 8.1e-23 109.8 63 84.1
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 8.1e-23 109.8 63 82.5
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 8.1e-23 109.8 63 79.4
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 1.4e-22 109.0 63 82.5
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 1.4e-22 109.0 63 82.5
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 1.4e-22 109.0 63 82.5
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.8e-22 108.6 62 80.6
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 1.8e-22 108.6 63 81.0
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 1.8e-22 108.6 63 82.5
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 1.8e-22 108.6 63 82.5
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 1.8e-22 108.6 63 82.5
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 1.8e-22 108.6 63 82.5
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 1.8e-22 108.6 63 82.5
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 3.1e-22 107.8 63 81.0
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 4.0e-22 107.5 60 83.3
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 5.3e-22 107.1 62 82.3
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 5.3e-22 107.1 62 82.3
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 9.0e-22 106.3 56 87.5
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 9.0e-22 106.3 63 81.0
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 9.0e-22 106.3 63 81.0
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 9.0e-22 106.3 59 83.1
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.2e-21 105.9 63 79.4
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 1.7e-20 102.1 63 76.2
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 3.8e-20 100.9 50 92.0
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 3.8e-20 100.9 63 74.6
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 3.8e-20 100.9 63 74.6
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.2e-19 97.8 63 69.8
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 7.1e-19 96.7 62 69.4
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 7.1e-19 96.7 50 88.0
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 9.3e-19 96.3 50 88.0
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 9.3e-19 96.3 62 72.6
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 1.6e-18 95.5 60 75.0
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 1.6e-18 95.5 60 75.0
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 2.1e-18 95.1 60 75.0
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 6.0e-18 93.6 60 73.3
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.3e-17 92.4 62 69.4
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 1.8e-17 92.0 56 75.0
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.8e-17 92.0 49 87.8
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 5.1e-17 90.5 55 78.2
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 1.9e-16 88.6 59 71.2
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 4.3e-16 87.4 56 73.2
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 7.4e-16 86.7 62 61.3
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 1.6e-15 85.5 62 59.7
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.8e-15 84.0 47 85.1
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 6.3e-15 83.6 60 65.0
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 4.1e-14 80.9 56 66.1
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 4.1e-14 80.9 56 66.1
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 6.9e-14 80.1 42 90.5
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 1.2e-13 79.3 56 64.3
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 4.6e-10 67.4 53 56.6
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 3.9e-09 64.3 62 48.4
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 1.1e-06 56.2 44 54.5


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