Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.9e-175 619.0 305 100.0
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.8e-89 332.8 307 59.0
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 3.1e-88 329.3 309 58.9
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 2.6e-87 326.2 302 58.9
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 3.4e-87 325.9 309 58.9
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 4.4e-87 325.5 306 59.5
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 5.8e-87 325.1 308 58.8
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 2.4e-85 319.7 300 58.7
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 3.2e-85 319.3 312 59.6
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 4.1e-85 318.9 312 57.7
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 7.1e-85 318.2 307 58.3
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 7.1e-85 318.2 313 58.1
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 3.5e-84 315.8 306 58.2
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 7.8e-84 314.7 310 57.7
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.3e-83 313.2 310 57.7
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 3.0e-83 312.8 312 58.0
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 5.1e-83 312.0 306 58.2
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.1e-82 310.8 307 57.3
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.9e-82 310.1 310 58.7
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 2.1e-81 306.6 310 56.8
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 2.1e-81 306.6 310 56.8
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 2.8e-81 306.2 319 54.5
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 4.0e-80 302.4 315 54.9
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 6.9e-80 301.6 315 54.6
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.5e-79 300.4 304 54.9
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 5.8e-79 298.5 300 56.0
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 3.8e-78 295.8 319 53.3
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 4.9e-78 295.4 316 54.4
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 2.4e-77 293.1 322 53.1
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 3.2e-77 292.7 303 53.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 4.2e-77 292.4 308 54.2
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 4.2e-77 292.4 306 56.9
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 4.2e-77 292.4 320 53.4
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 7.1e-77 291.6 312 55.1
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 7.1e-77 291.6 295 56.3
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 9.3e-77 291.2 304 54.3
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 2.1e-76 290.0 300 53.7
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 3.5e-76 289.3 325 53.2
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.8e-76 288.1 300 53.7
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.3e-75 287.3 340 50.9
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.3e-75 287.3 300 53.3
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.3e-75 286.6 300 53.3
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.9e-74 283.5 298 53.4
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.9e-74 283.5 300 52.7
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.9e-74 283.5 300 52.7
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.5e-74 283.1 308 53.9
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.3e-74 282.3 299 52.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 4.3e-74 282.3 308 56.8
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 9.6e-74 281.2 322 51.9
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.1e-73 280.0 300 52.3
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 6.2e-73 278.5 301 54.2
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.4e-72 277.3 306 52.0
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 1.8e-72 276.9 298 54.7
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.8e-72 276.9 341 49.9
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 2.4e-72 276.6 298 52.3
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 5.3e-72 275.4 305 53.8
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 5.3e-72 275.4 317 54.3
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.2e-71 274.2 299 51.8
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.0e-71 273.5 292 53.4
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.6e-71 273.1 286 54.5
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.6e-71 273.1 306 54.9
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 3.4e-71 272.7 302 51.3
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 9.9e-71 271.2 299 51.5
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.3e-70 270.8 315 51.7
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.7e-70 270.4 258 57.4
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.7e-70 270.4 306 52.0
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.7e-70 270.4 309 53.7
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 4.9e-70 268.9 315 51.4
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.4e-70 268.5 310 51.6
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 8.4e-70 268.1 305 53.1
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.1e-69 267.7 339 49.0
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.4e-69 267.3 289 56.4
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.9e-69 266.9 302 51.3
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.2e-69 265.8 313 50.8
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 5.4e-69 265.4 294 53.1
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 9.3e-69 264.6 287 52.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.3e-67 260.8 283 54.1
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 2.3e-67 260.0 291 52.2
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 3.3e-66 256.1 319 48.6
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 1.6e-65 253.8 135 87.4
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.4e-64 250.0 309 48.2
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 9.9e-63 244.6 337 46.0
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 2.4e-61 240.0 354 44.1
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 3.2e-61 239.6 354 43.8
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 7.9e-60 235.0 323 46.1
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.9e-58 230.3 166 66.9
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 2.8e-57 226.5 134 77.6
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.5e-53 213.4 109 89.0
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.8e-51 207.2 293 44.7
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 5.7e-50 202.2 109 86.2
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 6.3e-49 198.7 306 46.4
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.4e-48 197.6 111 81.1
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 6.9e-48 195.3 280 42.9
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 1.3e-46 191.0 300 42.7
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.8e-46 189.5 136 71.3
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 1.4e-45 187.6 260 46.5
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 4.2e-45 186.0 99 86.9
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 2.5e-42 176.8 98 83.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.7e-41 174.1 184 50.5
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.2e-41 173.7 98 82.7
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 4.1e-40 169.5 216 49.5
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.1e-37 161.4 124 59.7
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 9.4e-37 158.3 131 66.4
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 5.1e-35 152.5 98 76.5
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 8.8e-35 151.8 98 71.4
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 1.7e-25 120.9 209 39.7
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 5.3e-24 115.9 217 38.2
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.6e-23 113.6 188 43.6
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.1e-21 108.2 211 37.4
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.0e-19 101.7 191 38.2
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.8e-19 100.9 202 40.1
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.4e-18 96.3 193 37.3
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.3e-16 89.4 205 34.1
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.1e-13 81.6 42 85.7
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 7.2e-13 79.0 41 85.4
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 8.0e-12 75.5 102 44.1
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 8.0e-12 75.5 102 44.1
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 8.0e-12 75.5 102 44.1
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.0e-11 75.1 102 44.1
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 8.3e-09 65.5 44 63.6
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.4e-08 64.7 94 41.5


User provided reference genes

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