Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 1.8e-174 615.9 330 100.0
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 8.8e-81 304.7 328 57.3
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 3.1e-78 296.2 332 56.3
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.1e-78 295.8 331 57.4
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.8e-76 289.3 308 57.5
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.0e-73 281.2 334 54.5
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 6.7e-73 278.5 328 53.7
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.5e-72 277.3 315 55.2
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.4e-72 275.8 343 51.9
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.3e-71 274.2 335 53.4
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.8e-71 272.3 330 51.5
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.1e-70 271.2 322 53.4
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.4e-70 270.8 331 52.3
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.1e-70 269.6 301 54.5
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.1e-70 269.2 315 53.3
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 1.2e-69 267.7 330 51.5
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.0e-69 266.9 309 55.3
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 3.5e-69 266.2 332 53.9
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 4.5e-69 265.8 331 52.6
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.0e-68 264.6 335 51.9
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 1.7e-68 263.8 330 50.9
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.2e-68 263.5 333 50.2
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 3.8e-68 262.7 346 51.4
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 3.8e-68 262.7 319 53.3
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 1.9e-67 260.4 361 48.8
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 2.5e-67 260.0 285 55.8
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 7.2e-67 258.5 332 50.0
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 7.2e-67 258.5 329 50.2
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 9.4e-67 258.1 333 50.5
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 1.2e-66 257.7 327 49.5
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.6e-66 257.3 324 51.2
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.6e-66 257.3 359 48.5
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 2.1e-66 256.9 351 49.6
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.7e-66 256.5 324 51.2
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 4.7e-66 255.8 311 52.1
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.0e-65 254.6 322 50.3
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.4e-65 254.2 326 52.1
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.0e-65 253.1 326 51.8
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 5.2e-65 252.3 323 51.4
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 8.8e-65 251.5 338 49.7
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.0e-64 250.4 323 50.5
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 4.4e-64 249.2 315 49.5
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 5.7e-64 248.8 335 47.8
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 7.4e-64 248.4 333 48.3
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 9.7e-64 248.1 329 48.0
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 6.3e-63 245.4 319 50.5
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 1.1e-62 244.6 320 49.7
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.8e-62 243.8 333 48.3
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 7.0e-62 241.9 315 48.6
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 1.6e-61 240.7 393 45.0
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.0e-61 240.4 336 48.8
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 2.0e-61 240.4 347 47.0
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.6e-61 240.0 342 48.2
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.7e-60 237.3 326 48.2
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.7e-60 237.3 322 47.5
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 1.7e-60 237.3 357 46.2
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 2.2e-60 236.9 296 50.3
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 2.9e-60 236.5 321 48.3
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 3.8e-60 236.1 345 47.0
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 5.0e-60 235.7 213 62.9
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 1.5e-59 234.2 317 48.3
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 3.2e-59 233.0 342 47.7
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 4.2e-59 232.6 318 50.3
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.2e-58 231.1 331 48.9
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 3.6e-58 229.6 333 46.8
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 3.6e-58 229.6 344 45.3
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 4.7e-58 229.2 315 47.9
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 1.0e-57 228.0 226 58.4
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.8e-57 227.3 315 46.7
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 2.3e-57 226.9 329 46.5
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 3.0e-57 226.5 318 47.5
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 3.0e-57 226.5 321 47.7
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 6.8e-57 225.3 331 47.1
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 8.8e-57 224.9 346 47.1
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 1.5e-56 224.2 320 46.6
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 3.4e-56 223.0 320 46.9
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 7.5e-56 221.9 297 50.8
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 2.8e-55 219.9 324 46.3
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 6.3e-55 218.8 287 47.7
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 3.1e-54 216.5 317 45.4
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 9.1e-54 214.9 363 44.4
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.2e-53 214.5 346 44.2
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 2.7e-53 213.4 314 47.5
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 2.7e-53 213.4 358 44.7
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 3.5e-53 213.0 351 43.9
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 4.5e-53 212.6 351 41.6
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 5.9e-53 212.2 351 41.3
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.3e-52 211.1 289 49.1
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.1e-51 208.0 340 45.9
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.5e-51 207.6 323 46.4
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 1.9e-51 207.2 322 44.4
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 5.5e-51 205.7 318 45.3
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 9.4e-51 204.9 327 43.7
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 1.6e-50 204.1 336 46.4
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.7e-50 203.4 281 45.9
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.6e-50 203.0 335 43.0
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.2e-49 199.1 335 42.1
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.0e-48 197.2 330 43.3
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 4.4e-48 196.1 337 42.1
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 7.5e-48 195.3 234 53.0
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 7.5e-48 195.3 335 42.1
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.5e-48 195.3 335 42.1
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 3.1e-46 189.9 330 41.8
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 3.1e-46 189.9 182 59.9
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 4.1e-46 189.5 331 42.0
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 9.1e-46 188.3 383 40.5
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 1.6e-45 187.6 355 42.3
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 8.6e-44 181.8 365 38.9
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 8.6e-44 181.8 358 39.7
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.1e-43 181.4 313 43.5
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 3.3e-43 179.9 221 51.6
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 4.0e-41 172.9 310 44.2
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 6.8e-41 172.2 211 48.3
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 1.5e-40 171.0 256 46.1
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.6e-40 170.2 324 42.0
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 2.2e-39 167.2 212 50.9
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 3.7e-39 166.4 505 30.9
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 4.1e-38 162.9 326 41.1
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 2.3e-36 157.1 341 38.4
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.5e-35 154.5 264 43.6
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.1e-34 150.6 168 52.4
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 2.3e-33 147.1 125 66.4
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 8.3e-31 138.7 126 62.7
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 4.1e-30 136.3 290 37.6
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 7.0e-30 135.6 179 50.8
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 3.9e-28 129.8 122 62.3
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 3.4e-24 116.7 238 39.1
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 1.9e-22 110.9 211 38.4
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.1e-17 95.1 67 68.7
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 1.4e-17 94.7 117 51.3
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 2.9e-15 87.0 215 32.6
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 8.4e-15 85.5 107 46.7
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 4.1e-14 83.2 81 59.3
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.6e-13 81.3 191 34.6
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.6e-13 81.3 191 34.6
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 6.6e-12 75.9 197 32.5
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 2.5e-11 73.9 89 44.9
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 4.0e-09 66.6 51 68.6
unitig_749.g13565 Utricularia gibba HOM05D005155 ORTHO05D006266 1.7e-07 61.2 149 33.6
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 3.8e-07 60.1 83 45.8
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 3.8e-07 60.1 174 35.6


User provided reference genes

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