Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0003180 Simmondsia chinensis HOM05D000691 ORTHO05D000378 3.3e-52 208.0 98 100.0
FvH4_7g04123 Fragaria vesca HOM05D000691 ORTHO05D000378 6.3e-11 70.9 53 62.3
FvH4_3g36090 Fragaria vesca HOM05D014995 ORTHO05D035483 1.8e-10 69.3 53 60.4
FvH4_6g17710 Fragaria vesca HOM05D014995 ORTHO05D000378 5.4e-10 67.8 53 62.3
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 1.2e-09 66.6 54 57.4
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 5.9e-09 64.3 54 55.6
ATR0561G181 Amborella trichopoda HOM05D000691 ORTHO05D000378 1.0e-08 63.5 54 51.9
AUR62042281 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.0e-08 63.5 51 54.9
FvH4_4g03471 Fragaria vesca HOM05D000691 ORTHO05D000378 1.7e-08 62.8 53 54.7
Manes.13G002614 Manihot esculenta HOM05D000691 ORTHO05D000378 1.7e-08 62.8 93 39.8
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-08 62.4 54 55.6
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-08 62.4 54 55.6
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-08 62.4 54 55.6
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-08 62.4 54 55.6
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 62.4 54 53.7
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 62.4 84 41.7
Oeu052582.1 Olea europaea HOM05D000691 ORTHO05D000378 2.9e-08 62.0 54 51.9
Sopen08g009080 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-08 62.0 54 53.7
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 61.6 54 53.7
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 61.6 54 53.7
Sopen01g023070 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen01g025050 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen07g017950 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 51.9
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.2 54 53.7
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-08 60.8 54 51.9
Sopen08g015300 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 54 53.7
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-08 60.8 54 53.7
Oeu003087.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu003392.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu018548.1 Olea europaea HOM05D000004 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu025520.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu027530.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu028951.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu034465.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu062087.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Oeu062537.1 Olea europaea HOM05D000691 ORTHO05D000378 8.5e-08 60.5 58 50.0
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 1.1e-07 60.1 58 53.4
Oeu012157.1 Olea europaea HOM05D000691 ORTHO05D000378 1.5e-07 59.7 58 50.0
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 59.7 54 51.9
Sopen08g017070 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 59.7 54 51.9
CAN.G492.85 Capsicum annuum HOM05D000691 ORTHO05D000378 1.9e-07 59.3 61 49.2
Oeu003524.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-07 59.3 58 48.3
Oeu025093.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-07 59.3 58 50.0
Oeu042346.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-07 59.3 58 50.0
Oeu048282.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-07 59.3 58 48.3
Oeu050628.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-07 59.3 58 48.3
Sopen11g018910 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 59.3 54 51.9
EL10Ac2g03487 Beta vulgaris HOM05D000691 ORTHO05D000378 2.5e-07 58.9 52 48.1
Oeu026473.1 Olea europaea HOM05D000691 ORTHO05D000378 2.5e-07 58.9 58 48.3
Oeu041682.1 Olea europaea HOM05D000691 ORTHO05D000378 2.5e-07 58.9 58 48.3
Sopen02g007540 Solanum pennellii HOM05D000691 ORTHO05D000378 2.5e-07 58.9 54 51.9
Sopen10g020250 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-07 58.9 54 51.9
ATR0697G104 Amborella trichopoda HOM05D000691 ORTHO05D000378 3.2e-07 58.5 50 48.0
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 3.2e-07 58.5 56 50.0
Oeu007084.1 Olea europaea HOM05D000691 ORTHO05D000378 3.2e-07 58.5 56 50.0
Oeu016457.1 Olea europaea HOM05D000691 ORTHO05D000378 3.2e-07 58.5 58 48.3
Oeu032031.1 Olea europaea HOM05D000691 ORTHO05D000378 3.2e-07 58.5 58 48.3
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-07 58.5 54 50.0
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-07 58.5 61 45.9
EL10Ac7g16543 Beta vulgaris HOM05D000691 ORTHO05D000378 4.2e-07 58.2 54 50.0
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 4.2e-07 58.2 54 53.7
Oeu027505.1 Olea europaea HOM05D000691 ORTHO05D000378 4.2e-07 58.2 58 48.3
Oeu049465.1 Olea europaea HOM05D000691 ORTHO05D000378 4.2e-07 58.2 56 50.0
Oeu058973.1 Olea europaea HOM05D000691 ORTHO05D000378 4.2e-07 58.2 58 48.3
Sopen01g024900 Solanum pennellii HOM05D000691 ORTHO05D000378 4.2e-07 58.2 54 51.9
Oeu005833.1 Olea europaea HOM05D000691 ORTHO05D000378 5.5e-07 57.8 58 46.6
Sopen02g003780 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 57.8 54 51.9
Sopen07g008180 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 57.8 54 51.9
Oeu002226.1 Olea europaea HOM05D000691 ORTHO05D000378 7.2e-07 57.4 58 48.3
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 7.2e-07 57.4 88 38.6
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-07 57.4 54 50.0
AUR62029860 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.4e-07 57.0 56 46.4
MELO3C030703.2 Cucumis melo HOM05D010785 ORTHO05D000378 9.4e-07 57.0 51 56.9
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 9.4e-07 57.0 54 53.7
Sopen08g011580 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-07 57.0 54 50.0
MELO3C032462.2 Cucumis melo HOM05D010785 ORTHO05D000378 1.2e-06 56.6 51 56.9
Oeu000188.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-06 56.6 54 50.0
Oeu011704.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-06 56.6 58 46.6
Oeu017935.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-06 56.6 62 45.2
Sopen08g011070 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-06 56.6 54 48.1
Sopen12g024680 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 56.6 54 48.1
CSS0003516 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 1.6e-06 56.2 54 50.0
Oeu013775.1 Olea europaea HOM05D000691 ORTHO05D000378 1.6e-06 56.2 58 46.6
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-06 56.2 54 51.9
EL10Ac6g14588 Beta vulgaris HOM05D000691 ORTHO05D000378 2.1e-06 55.8 54 46.3
Oeu041244.1 Olea europaea HOM05D000691 ORTHO05D000378 2.1e-06 55.8 58 44.8
Oeu048160.1 Olea europaea HOM05D000691 ORTHO05D000378 2.1e-06 55.8 58 46.6
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 2.1e-06 55.8 54 53.7
Sopen01g010660 Solanum pennellii HOM05D000002 ORTHO05D000378 2.1e-06 55.8 54 50.0
ATR1131G040 Amborella trichopoda HOM05D000691 ORTHO05D000378 2.7e-06 55.5 44 54.5
FvH4_6g15222 Fragaria vesca HOM05D000691 ORTHO05D000378 2.7e-06 55.5 54 51.9
FvH4_6g15223 Fragaria vesca HOM05D000691 ORTHO05D000378 2.7e-06 55.5 54 51.9
Oeu033485.1 Olea europaea HOM05D000691 ORTHO05D000378 2.7e-06 55.5 56 46.4
EL10Ac9g20847 Beta vulgaris HOM05D000691 ORTHO05D000378 3.6e-06 55.1 48 56.2
Oeu029673.1 Olea europaea HOM05D000691 ORTHO05D000378 3.6e-06 55.1 58 46.6
Sopen02g008960 Solanum pennellii HOM05D000691 ORTHO05D000378 3.6e-06 55.1 53 49.1
Oeu036281.1 Olea europaea HOM05D000691 ORTHO05D000378 4.7e-06 54.7 58 44.8
Sopen04g017820 Solanum pennellii HOM05D000004 ORTHO05D000378 4.7e-06 54.7 54 48.1
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-06 54.3 54 48.1
Thecc.05G137100 Theobroma cacao HOM05D000004 ORTHO05D000378 6.1e-06 54.3 48 50.0
Lj1C763G4 Lonicera japonica HOM05D000691 ORTHO05D000378 8.0e-06 53.9 54 46.3
Oeu043573.1 Olea europaea HOM05D000691 ORTHO05D000378 8.0e-06 53.9 58 44.8
Sopen10g024190 Solanum pennellii HOM05D000014 ORTHO05D000002 8.0e-06 53.9 52 48.1


User provided reference genes

Program Settings