Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 0.0e+00 2540.0 1309 100.0
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 2.7e-189 667.2 1386 38.7
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.1e-161 575.5 1376 34.7
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 1.3e-156 558.5 1355 36.2
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 5.1e-156 556.6 1352 34.4
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 7.1e-150 536.2 1431 31.4
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 6.6e-148 529.6 1398 34.8
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 1.3e-146 525.4 1416 34.3
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 1.2e-144 518.8 1460 32.9
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 5.4e-142 510.0 1420 32.7
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 4.3e-139 500.4 1410 32.4
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 1.4e-137 495.4 1421 31.8
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 2.4e-137 494.6 1438 31.5
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.3e-135 488.8 1402 31.7
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 5.3e-129 466.8 1353 32.4
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 2.5e-126 458.0 1431 30.1
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 6.0e-125 453.4 1390 31.2
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.6e-122 445.3 1324 30.6
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.5e-120 438.7 1324 30.4
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 3.4e-120 437.6 1489 29.4
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 1.7e-119 435.3 1362 31.4
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 6.5e-119 433.3 1510 29.9
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 1.9e-118 431.8 1421 29.8
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 7.2e-118 429.9 1406 30.3
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 2.1e-117 428.3 1399 30.5
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 6.7e-116 423.3 1391 30.1
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 4.3e-115 420.6 1450 29.4
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 4.8e-114 417.2 1390 30.9
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 8.2e-114 416.4 1415 29.3
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 3.4e-112 411.0 1220 30.1
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 1.3e-111 409.1 1343 29.3
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 2.2e-111 408.3 1407 30.2
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 7.4e-107 393.3 1390 29.7
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 1.7e-106 392.1 1403 29.0
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 2.4e-105 388.3 1364 28.7
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 5.0e-103 380.6 1390 29.1
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 8.5e-103 379.8 1424 28.9
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 5.5e-102 377.1 975 33.3
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.2e-101 375.9 1232 29.4
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.6e-101 374.4 1395 28.7
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 3.6e-101 374.4 1417 29.2
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.0e-100 371.3 1380 28.2
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 6.7e-100 370.2 1371 30.4
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 1.1e-99 369.4 1397 27.8
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 3.3e-99 367.9 1428 28.4
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 5.7e-99 367.1 1387 29.1
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 3.7e-98 364.4 1407 28.4
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 6.3e-98 363.6 1375 29.2
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 1.2e-96 359.4 1373 28.3
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 2.0e-96 358.6 1329 28.7
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 4.5e-96 357.5 1372 28.4
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 9.4e-94 349.7 1391 28.0
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.6e-93 347.8 1344 28.6
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.6e-93 347.8 1344 28.6
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 4.7e-93 347.4 1405 28.4
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 3.0e-92 344.7 1370 28.3
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.8e-89 335.5 1338 29.4
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 7.0e-89 333.6 1226 28.3
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 1.2e-88 332.8 1331 26.8
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 4.5e-88 330.9 1515 26.9
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 1.7e-87 328.9 1365 28.2
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 4.7e-85 320.9 1361 27.2
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 1.0e-84 319.7 1337 27.2
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 2.0e-83 315.5 994 29.2
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 1.7e-82 312.4 1367 27.7
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 4.8e-82 310.8 1381 26.4
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 4.8e-82 310.8 988 29.4
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 3.1e-81 308.1 1323 27.8
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 2.3e-79 302.0 1337 26.4
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 2.3e-79 302.0 1337 26.4
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 1.9e-78 298.9 1338 26.2
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 3.3e-78 298.1 1331 26.3
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 3.3e-78 298.1 1396 27.4
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 3.6e-77 294.7 1210 27.4
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 5.2e-76 290.8 1333 26.1
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 6.3e-74 283.9 1374 25.9
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 1.7e-71 275.8 1247 26.8
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 5.0e-71 274.2 1329 26.1
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 8.6e-71 273.5 1386 24.7
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 1.1e-70 273.1 424 38.0
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 1.5e-70 272.7 408 38.2
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 1.5e-70 272.7 1322 25.2
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 5.6e-70 270.8 1382 26.6
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 4.7e-69 267.7 1330 26.4
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 1.0e-68 266.5 1579 25.4
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 3.1e-68 265.0 1107 28.3
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 6.8e-68 263.8 1344 25.2
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.4e-65 256.1 1344 26.9
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 2.4e-65 255.4 735 31.7
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 3.0e-63 248.4 344 41.0
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.3e-62 245.0 487 34.5
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 4.4e-59 234.6 1507 25.3
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 9.8e-59 233.4 513 33.3
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 1.3e-58 233.0 1429 24.5
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 7.0e-57 227.3 1356 25.6
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 6.0e-56 224.2 421 35.4
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 6.2e-53 214.2 485 31.5
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 1.8e-52 212.6 1394 24.9
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 1.8e-52 212.6 493 32.3
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 4.4e-51 208.0 406 34.2
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 4.9e-50 204.5 1364 24.9
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 2.4e-49 202.2 378 32.5
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 9.2e-49 200.3 1397 24.6
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 2.7e-48 198.7 411 31.9
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 1.7e-47 196.1 279 41.2
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.2e-45 189.9 918 25.8
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 1.1e-44 186.8 1316 23.5
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 2.4e-44 185.7 1306 23.2
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.5e-38 166.4 272 36.8
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 5.6e-38 164.5 323 31.6
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 4.2e-33 148.3 250 45.2
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 1.5e-30 139.8 139 51.8
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 2.8e-29 135.6 365 32.9
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 2.4e-25 122.5 236 43.2
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 9.3e-25 120.6 365 34.0
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 4.0e-20 105.1 146 37.7
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 5.3e-20 104.8 243 35.8
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 5.8e-19 101.3 314 30.9
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 2.2e-18 99.4 131 42.0
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 2.5e-17 95.9 149 38.9
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 1.3e-15 90.1 128 43.0
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 4.5e-11 75.1 91 48.4
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 1.0e-10 73.9 119 33.6
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 3.8e-10 72.0 103 38.8
ECA240G0272 Erigeron canadensis HOM05D004103 ORTHO05D005242 9.3e-09 67.4 75 52.0
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 2.3e-07 62.8 76 46.1
SEGI_14020 Sequoiadendron giganteum HOM05D005171 ORTHO05D026698 2.3e-07 62.8 210 31.4
MD09G1132400 Malus domestica HOM05D005171 ORTHO05D006343 3.9e-07 62.0 167 31.7
SEGI_34464 Sequoiadendron giganteum HOM05D005171 ORTHO05D030606 3.9e-07 62.0 145 24.1
Actinidia12355 Actinidia chinensis HOM05D005171 ORTHO05D006343 8.7e-07 60.8 313 24.6
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 1.9e-06 59.7 150 30.7
Actinidia12354 Actinidia chinensis HOM05D005171 ORTHO05D006343 9.7e-06 57.4 86 40.7


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