Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0002050 Simmondsia chinensis HOM05D000343 ORTHO05D387733 3.1e-98 361.7 169 100.0
Sc22g0003160 Simmondsia chinensis HOM05D000343 ORTHO05D002777 6.0e-17 91.7 58 79.3
HanXRQChr13g0398031 Helianthus annuus HOM05D000343 ORTHO05D019691 7.8e-09 64.7 165 29.7
Prupe.8G060400 Prunus persica HOM05D000343 ORTHO05D002777 1.7e-08 63.5 104 33.7
MD05G1044900 Malus domestica HOM05D000343 ORTHO05D002777 6.6e-08 61.6 101 35.6
FvH4_2g11930 Fragaria vesca HOM05D000343 ORTHO05D002777 4.3e-07 58.9 56 50.0
FAN24G2206 Fragaria x ananassa HOM05D000343 ORTHO05D002777 4.3e-07 58.9 56 50.0
GSVIVG01038740001 Vitis vinifera HOM05D000343 ORTHO05D002777 4.3e-07 58.9 54 53.7
Nn5g30120 Nelumbo nucifera HOM05D000343 ORTHO05D002777 5.6e-07 58.5 54 53.7
vmacro01824 Vaccinium macrocarpon HOM05D000343 ORTHO05D002777 9.5e-07 57.8 54 55.6
CSS0044959 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D002777 1.2e-06 57.4 99 37.4
HanXRQChr03g0066901 Helianthus annuus HOM05D000343 ORTHO05D002777 1.2e-06 57.4 58 53.4
HanXRQChr15g0467001 Helianthus annuus HOM05D000343 ORTHO05D019691 1.2e-06 57.4 58 53.4
FAN20G2112 Fragaria x ananassa HOM05D000343 ORTHO05D002777 1.6e-06 57.0 54 48.1
FAN27G2388 Fragaria x ananassa HOM05D000343 ORTHO05D002777 1.6e-06 57.0 54 48.1
Atru.chr6.1136 Acer truncatum HOM05D000343 ORTHO05D002777 2.1e-06 56.6 56 51.8
FAN15G3294 Fragaria x ananassa HOM05D000343 ORTHO05D002777 2.1e-06 56.6 54 50.0
Psat7g098280 Pisum sativum HOM05D000343 ORTHO05D002777 2.1e-06 56.6 56 53.6
QL11p020866 Quercus lobata HOM05D000343 ORTHO05D002777 2.1e-06 56.6 54 50.0
TPR.G10457 Trifolium pratense HOM05D000343 ORTHO05D002777 2.1e-06 56.6 66 43.9
CAN.G523.72 Capsicum annuum HOM05D000343 ORTHO05D002777 2.8e-06 56.2 109 33.9
ECA240G1089 Erigeron canadensis HOM05D000343 ORTHO05D002777 2.8e-06 56.2 58 51.7
Medtr4g094232 Medicago truncatula HOM05D000343 ORTHO05D002777 2.8e-06 56.2 56 53.6
Rhsim11G0136600 Rhododendron simsii HOM05D000343 ORTHO05D002777 2.8e-06 56.2 54 51.9
Lsat_1_v5_gn_9_117160 Lactuca sativa HOM05D000343 ORTHO05D002777 3.6e-06 55.8 58 50.0
Lalb_Chr04g0256531 Lupinus albus HOM05D000343 ORTHO05D002777 3.6e-06 55.8 54 48.1
Phvul.002G208800 Phaseolus vulgaris HOM05D000343 ORTHO05D002777 4.7e-06 55.5 54 48.1
RcHm_v2.0_Chr6g0271821 Rosa chinensis HOM05D000343 ORTHO05D002777 4.7e-06 55.5 54 48.1
PSO541G1663 Papaver somniferum HOM05D000343 ORTHO05D002777 6.2e-06 55.1 64 45.3
PSO781G0273 Papaver somniferum HOM05D000343 ORTHO05D002777 6.2e-06 55.1 64 45.3
Ca_18353_v3 Cicer arietinum L. HOM05D000343 ORTHO05D002777 8.1e-06 54.7 56 51.8
Glyma.05G117400 Glycine max HOM05D000343 ORTHO05D002777 8.1e-06 54.7 56 48.2
Hma1.2p1_0704F.1_g206650 Hydrangea macrophylla HOM05D000343 ORTHO05D002777 8.1e-06 54.7 64 48.4
TWI59G0918 Tripterygium wilfordii HOM05D000343 ORTHO05D002777 8.1e-06 54.7 99 33.3


User provided reference genes

Program Settings