Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0007720 Simmondsia chinensis HOM05D007561 ORTHO05D007661 7.8e-168 594.0 357 100.0
Sc13g0000670 Simmondsia chinensis HOM05D007561 ORTHO05D007661 2.1e-35 154.1 372 35.2
AUR62020949 Chenopodium quinoa HOM05D007561 ORTHO05D007661 4.5e-14 83.2 288 34.7
AUR62018475 Chenopodium quinoa HOM05D007561 ORTHO05D007661 6.5e-13 79.3 292 30.1
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 4.2e-12 76.6 327 28.4
TAR561G0001 Trochodendron aralioides HOM05D007561 ORTHO05D007661 5.5e-12 76.3 347 28.2
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 4.6e-11 73.2 310 28.1
PGR042G3351 Punica granatum HOM05D007561 ORTHO05D007661 6.1e-11 72.8 333 28.2
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 7.9e-11 72.4 322 29.2
Sopen10g031840 Solanum pennellii HOM05D007561 ORTHO05D007661 1.8e-10 71.2 309 27.8
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 3.9e-10 70.1 312 26.3
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 5.1e-10 69.7 330 31.5
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 1.1e-09 68.6 318 27.4
Gohir.A13G114700 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.5e-09 68.2 370 28.4
Ah.04g149900 Amaranthus hybridus HOM05D007561 ORTHO05D007661 3.3e-09 67.0 299 28.1
RhsimUnG0021900 Rhododendron simsii HOM05D007561 ORTHO05D007661 5.7e-09 66.2 302 29.1
Solyc10g081340.1 Solanum lycopersicum HOM05D007561 ORTHO05D007661 5.7e-09 66.2 307 26.7
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 9.7e-09 65.5 333 25.2
CiPaw.09G161100 Carya illinoinensis HOM05D007561 ORTHO05D007661 1.3e-08 65.1 320 28.1
Nitab4.5_0000811g0050 Nicotiana tabacum HOM05D007561 ORTHO05D007661 2.2e-08 64.3 284 27.8
Atru.chr8.931 Acer truncatum HOM05D007561 ORTHO05D007661 2.8e-08 63.9 364 27.2
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 2.8e-08 63.9 302 28.1
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 2.8e-08 63.9 312 26.9
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 3.7e-08 63.5 314 28.3
Gorai.013G132100 Gossypium raimondii HOM05D007561 ORTHO05D007661 8.2e-08 62.4 304 29.6
Nitab4.5_0000613g0170 Nicotiana tabacum HOM05D007561 ORTHO05D007661 1.4e-07 61.6 293 28.0
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 1.8e-07 61.2 323 26.0
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 2.4e-07 60.8 365 26.6
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 2.4e-07 60.8 306 28.1
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 4.1e-07 60.1 87 44.8
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 4.1e-07 60.1 87 44.8
CAN.G128.129 Capsicum annuum HOM05D007561 ORTHO05D007661 5.3e-07 59.7 314 26.1
Gohir.D13G117500 Gossypium hirsutum HOM05D007561 ORTHO05D007661 5.3e-07 59.7 369 26.8
Duzib177G0099 Durio zibethinus HOM05D007561 ORTHO05D007661 9.1e-07 58.9 372 25.8
Peaxi162Scf00575g00079 Petunia axillaris HOM05D007561 ORTHO05D007661 1.5e-06 58.2 90 40.0
Sed0024594 Sechium edule HOM05D007561 ORTHO05D007661 2.6e-06 57.4 332 26.2
MSTRG.19744 Avicennia marina HOM05D007561 ORTHO05D007661 4.5e-06 56.6 299 26.8
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 4.5e-06 56.6 91 37.4
Hma1.2p1_1686F.1_g297500 Hydrangea macrophylla HOM05D007561 ORTHO05D007661 4.5e-06 56.6 319 27.9
Sabra07G0062300 Salix brachista HOM05D007561 ORTHO05D007661 4.5e-06 56.6 297 27.6
Cfa019892 Carpinus fangiana HOM05D007561 ORTHO05D007661 7.7e-06 55.8 69 43.5


User provided reference genes

Program Settings