Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0003070 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.1e-52 209.5 95 100.0
Sc07g0002440 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.2e-17 93.2 77 50.6
Sc06g0010720 Simmondsia chinensis HOM05D009348 ORTHO05D015627 4.4e-17 91.3 83 51.8
Sc05g0006150 Simmondsia chinensis HOM05D013236 ORTHO05D007254 4.5e-14 81.3 89 43.8
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.2e-12 73.9 84 41.7
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.5e-12 73.6 84 42.9
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.0e-11 70.5 82 40.2
Sc04g0007770 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.8e-10 69.3 54 61.1
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.8e-10 67.0 79 43.0
Sc20g0000530 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.5e-09 66.2 89 37.1
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 1.7e-08 62.8 81 42.0
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-08 62.4 81 42.0
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.7e-08 61.6 84 35.7
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 4.9e-08 61.2 75 48.0
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 1.1e-07 60.1 86 37.2
Sc08g0007960 Simmondsia chinensis HOM05D013236 ORTHO05D015627 1.4e-07 59.7 67 46.3
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.4e-07 58.9 83 37.3
Prupe.3G190000 Prunus persica HOM05D008133 ORTHO05D009449 2.4e-07 58.9 84 31.0
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.1e-07 58.2 59 40.7
COL.COLO4_04041 Corchorus olitorius HOM05D008133 ORTHO05D007254 4.1e-07 58.2 81 30.9
Sc19g0005760 Simmondsia chinensis HOM05D013953 ORTHO05D016376 4.1e-07 58.2 66 33.3
arahy.Tifrunner.gnm1.ann1.MHV6FT Arachis hypogaea HOM05D027442 ORTHO05D007254 5.4e-07 57.8 87 33.3
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 7.0e-07 57.4 90 34.4
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-06 56.6 53 50.9
PSO017G5341 Papaver somniferum HOM05D000003 ORTHO05D008897 1.6e-06 56.2 101 34.7
Atru.chr10.1383 Acer truncatum HOM05D000003 ORTHO05D000167 2.0e-06 55.8 84 35.7
FvH4_4g02991 Fragaria vesca HOM05D000003 ORTHO05D000022 2.0e-06 55.8 92 33.7
PSO824G0080 Papaver somniferum HOM05D007979 ORTHO05D008897 2.0e-06 55.8 84 35.7
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-06 55.5 79 34.2
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 3.5e-06 55.1 88 34.1
arahy.Tifrunner.gnm1.ann1.0Y1AJC Arachis hypogaea HOM05D027442 ORTHO05D000167 4.5e-06 54.7 81 34.6
EL10Ac5g12187 Beta vulgaris HOM05D000003 ORTHO05D000006 4.5e-06 54.7 90 33.3
FvH4_2g06831 Fragaria vesca HOM05D011824 ORTHO05D035622 4.5e-06 54.7 85 29.4
Prupe.1G283700 Prunus persica HOM05D008133 ORTHO05D009449 4.5e-06 54.7 84 29.8
PSO017G2467 Papaver somniferum HOM05D007979 ORTHO05D008897 5.9e-06 54.3 84 34.5
PSO675G4940 Papaver somniferum HOM05D007979 ORTHO05D008897 5.9e-06 54.3 84 35.7


User provided reference genes

Program Settings