Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0002020 Simmondsia chinensis HOM05D000036 ORTHO05D000095 1.3e-61 239.6 125 100.0
Sc19g0002000 Simmondsia chinensis HOM05D000036 ORTHO05D000095 2.0e-17 92.8 48 91.7
ECA236G4452 Erigeron canadensis HOM05D000036 ORTHO05D000095 2.9e-08 62.4 64 56.2
Solyc01g091050.4 Solanum lycopersicum HOM05D000036 ORTHO05D000095 2.9e-08 62.4 46 71.7
HanXRQChr06g0169441 Helianthus annuus HOM05D000036 ORTHO05D000095 3.7e-08 62.0 60 60.0
Lsat_1_v5_gn_7_8540 Lactuca sativa HOM05D000036 ORTHO05D000095 4.9e-08 61.6 55 63.6
Sopen01g036780 Solanum pennellii HOM05D000036 ORTHO05D000095 4.9e-08 61.6 46 69.6
DCAR_015873 Daucus carota HOM05D000036 ORTHO05D000095 3.2e-07 58.9 54 63.0
HanXRQChr03g0094001 Helianthus annuus HOM05D000036 ORTHO05D000095 5.4e-07 58.2 52 65.4
HanXRQChr03g0094011 Helianthus annuus HOM05D000036 ORTHO05D000095 5.4e-07 58.2 52 65.4
Rhsim07G0029900 Rhododendron simsii HOM05D000036 ORTHO05D000095 7.1e-07 57.8 46 65.2
ClCG01G004770 Citrullus lanatus HOM05D000036 ORTHO05D000095 9.2e-07 57.4 47 61.7
CsaV3_5G004960 Cucumis sativus L. HOM05D000036 ORTHO05D000095 9.2e-07 57.4 47 57.4
Rhsim09G0192200 Rhododendron simsii HOM05D000036 ORTHO05D000095 9.2e-07 57.4 68 52.9
vmacro09900 Vaccinium macrocarpon HOM05D000036 ORTHO05D000095 9.2e-07 57.4 56 58.9
ECA240G4141 Erigeron canadensis HOM05D000036 ORTHO05D000095 1.2e-06 57.0 46 69.6
HanXRQChr04g0122521 Helianthus annuus HOM05D000036 ORTHO05D000095 1.2e-06 57.0 54 59.3
Haze_13859 Corylus avellana HOM05D000036 ORTHO05D000095 1.6e-06 56.6 46 65.2
MELO3C005459.2 Cucumis melo HOM05D000036 ORTHO05D000095 1.6e-06 56.6 47 57.4
Migut.F00462 Erythranthe guttata HOM05D000036 ORTHO05D000095 2.1e-06 56.2 46 63.0
Migut.F00463 Erythranthe guttata HOM05D000036 ORTHO05D000095 2.1e-06 56.2 46 63.0
HanXRQChr03g0093991 Helianthus annuus HOM05D000036 ORTHO05D000095 2.1e-06 56.2 87 44.8
Lsat_1_v5_gn_3_127861 Lactuca sativa HOM05D000036 ORTHO05D000095 2.7e-06 55.8 46 69.6
PGSC0003DMG400025967 Solanum tuberosum HOM05D000036 ORTHO05D000095 2.7e-06 55.8 58 58.6
MELO3C006817.2 Cucumis melo HOM05D000036 ORTHO05D000095 3.5e-06 55.5 46 60.9
QL09p019421 Quercus lobata HOM05D000036 ORTHO05D000095 3.5e-06 55.5 82 48.8
Sed0018821 Sechium edule HOM05D000036 ORTHO05D000095 3.5e-06 55.5 60 51.7
ECA236G3793 Erigeron canadensis HOM05D000036 ORTHO05D000095 6.0e-06 54.7 46 67.4
ECA240G4706 Erigeron canadensis HOM05D000036 ORTHO05D000095 6.0e-06 54.7 56 58.9
Eucgr.E01463 Eucalyptus grandis HOM05D000036 ORTHO05D000095 6.0e-06 54.7 46 67.4
CSS0001476 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000095 7.8e-06 54.3 46 63.0
CSS0045663 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000095 7.8e-06 54.3 46 63.0
CiPaw.04G060800 Carya illinoinensis HOM05D000036 ORTHO05D000095 7.8e-06 54.3 88 45.5
Eucgr.E01454 Eucalyptus grandis HOM05D000036 ORTHO05D000095 7.8e-06 54.3 46 67.4
Lj5A413T25 Lonicera japonica HOM05D000036 ORTHO05D000095 7.8e-06 54.3 54 61.1


User provided reference genes

Program Settings