Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.4e-81 304.3 156 100.0
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 5.6e-62 241.1 156 80.8
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.8e-61 238.8 156 81.4
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 9.9e-59 230.3 156 76.9
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.7e-58 229.6 156 76.9
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.7e-58 229.6 156 76.9
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.4e-57 226.5 156 75.0
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.9e-57 226.1 156 75.6
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 5.4e-57 224.6 157 75.8
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 9.3e-57 223.8 156 76.3
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 75.0
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 75.0
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 78.8
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 2.7e-56 222.2 157 75.8
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 73.7
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 76.9
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.8e-55 219.5 161 73.9
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.3e-55 219.2 158 73.4
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 3.0e-55 218.8 152 75.7
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 3.0e-55 218.8 156 72.4
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 3.0e-55 218.8 157 74.5
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 3.0e-55 218.8 156 72.4
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 3.9e-55 218.4 156 72.4
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 5.1e-55 218.0 156 73.1
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 6.7e-55 217.6 156 73.7
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 6.7e-55 217.6 156 76.9
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 8.7e-55 217.2 156 73.7
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.1e-54 216.9 137 80.3
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.1e-54 216.9 157 73.9
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.9e-54 216.1 156 71.2
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.9e-54 216.1 155 72.3
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 2.5e-54 215.7 156 72.4
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 3.3e-54 215.3 159 71.1
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 5.6e-54 214.5 156 72.4
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 5.6e-54 214.5 156 75.0
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 5.6e-54 214.5 161 73.3
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 7.4e-54 214.2 156 75.6
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 7.4e-54 214.2 156 71.8
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 75.6
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 71.8
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 9.6e-54 213.8 150 75.3
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.3e-53 213.4 156 73.7
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.3e-53 213.4 156 75.0
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.6e-53 213.0 157 74.5
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 72.4
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.8e-53 212.2 156 72.4
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 3.7e-53 211.8 157 71.3
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 4.8e-53 211.5 144 77.8
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 4.8e-53 211.5 115 91.3
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 4.8e-53 211.5 156 71.8
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 4.8e-53 211.5 157 71.3
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 6.2e-53 211.1 157 71.3
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 6.2e-53 211.1 154 72.1
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 6.2e-53 211.1 156 71.8
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 8.1e-53 210.7 156 73.7
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.1e-52 210.3 156 68.6
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.1e-52 210.3 156 69.9
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 1.4e-52 209.9 156 71.2
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.4e-52 209.9 124 85.5
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.8e-52 209.5 156 71.2
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 1.8e-52 209.5 156 73.1
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 2.4e-52 209.1 157 70.7
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.4e-52 209.1 154 74.7
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 3.1e-52 208.8 158 72.2
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 3.1e-52 208.8 158 72.2
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 3.1e-52 208.8 135 80.0
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.0e-52 208.4 157 71.3
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 4.0e-52 208.4 157 72.0
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.3e-52 208.0 117 88.9
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 6.9e-52 207.6 124 84.7
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 6.9e-52 207.6 155 70.3
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 6.9e-52 207.6 122 86.1
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 1.2e-51 206.8 158 71.5
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.5e-51 206.5 127 82.7
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 2.0e-51 206.1 158 71.5
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 140 77.9
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 158 68.4
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 4.5e-51 204.9 158 71.5
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 5.8e-51 204.5 158 72.2
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 7.6e-51 204.1 158 70.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 7.6e-51 204.1 156 71.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.7e-50 203.0 125 83.2
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.9e-50 202.2 121 84.3
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 8.4e-50 200.7 159 68.6
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-49 200.3 158 70.9
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 1.9e-49 199.5 119 84.9
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 5.5e-49 198.0 115 89.6
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 5.5e-49 198.0 160 67.5
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 9.3e-49 197.2 122 80.3
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 8.7e-47 190.7 128 78.1
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 3.3e-46 188.7 129 76.7
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 4.0e-44 181.8 148 69.6
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 3.4e-43 178.7 133 70.7
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 2.5e-41 172.6 127 71.7
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 9.3e-41 170.6 137 66.4
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 3.0e-39 165.6 158 58.2
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 6.7e-39 164.5 127 69.3
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 8.7e-39 164.1 121 69.4
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.9e-38 162.9 144 64.6
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.9e-38 162.9 127 67.7
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.9e-38 162.9 130 68.5
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 3.3e-38 162.2 160 60.0
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 4.3e-38 161.8 128 68.8
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.8e-36 156.4 130 64.6
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.8e-36 156.4 104 73.1
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.7e-34 149.8 96 79.2
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 4.2e-33 145.2 100 75.0
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.1e-31 138.3 141 55.3
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.8e-15 86.7 64 73.4
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 3.7e-13 79.0 86 50.0
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 2.0e-11 73.2 105 40.0
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 4.4e-06 55.5 107 36.4


User provided reference genes

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