Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.6e-74 282.0 140 100.0
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 3.4e-50 201.8 124 75.0
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 9.9e-50 200.3 125 75.2
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.2e-49 199.1 127 74.8
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 2.9e-49 198.7 123 78.0
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 6.4e-49 197.6 135 69.6
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.4e-48 195.7 136 66.9
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 7.1e-48 194.1 136 68.4
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 9.2e-48 193.7 130 70.8
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 9.2e-48 193.7 132 70.5
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.6e-47 193.0 125 75.2
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.7e-47 192.2 137 69.3
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 3.5e-47 191.8 128 71.9
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 4.6e-47 191.4 131 69.5
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 6.0e-47 191.0 131 68.7
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.0e-46 190.3 129 69.0
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 2.3e-46 189.1 132 68.2
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.9e-46 188.3 116 76.7
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 3.9e-46 188.3 115 77.4
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 5.1e-46 188.0 118 77.1
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.1e-45 186.8 136 66.2
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.5e-45 186.4 129 68.2
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.9e-45 186.0 137 66.4
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 3.3e-45 185.3 128 71.1
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 7.3e-45 184.1 124 72.6
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 7.3e-45 184.1 118 76.3
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.3e-45 184.1 127 72.4
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.2e-44 183.3 126 69.0
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-44 183.3 127 72.4
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.6e-44 183.0 135 66.7
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.6e-44 183.0 128 68.8
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.6e-44 183.0 137 65.7
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 2.1e-44 182.6 144 63.9
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 2.1e-44 182.6 127 71.7
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.1e-44 182.6 136 68.4
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 3.6e-44 181.8 127 69.3
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.7e-44 181.4 127 70.9
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 4.7e-44 181.4 129 70.5
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.1e-43 180.3 140 64.3
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.4e-43 179.1 129 67.4
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 2.4e-43 179.1 129 67.4
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 2.4e-43 179.1 116 73.3
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 5.2e-43 177.9 146 63.0
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 6.9e-43 177.6 148 63.5
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 8.9e-43 177.2 125 67.2
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.2e-42 176.8 125 67.2
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.5e-42 176.4 133 62.4
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.5e-42 176.4 117 71.8
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.5e-42 176.4 131 65.6
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.5e-42 176.4 124 67.7
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.5e-42 176.4 116 73.3
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 2.6e-42 175.6 133 63.9
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 2.6e-42 175.6 132 63.6
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.6e-42 175.6 127 70.1
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 5.8e-42 174.5 143 65.0
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 5.8e-42 174.5 133 61.7
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.7e-41 172.9 162 56.2
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 2.2e-41 172.6 125 64.8
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 2.2e-41 172.6 131 63.4
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.2e-41 172.6 145 60.0
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 2.9e-41 172.2 131 65.6
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 3.8e-41 171.8 143 60.8
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 6.4e-41 171.0 143 62.9
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 8.4e-41 170.6 132 65.2
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 8.4e-41 170.6 116 73.3
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-40 170.2 116 73.3
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.9e-40 169.5 128 63.3
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 3.2e-40 168.7 125 65.6
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.2e-40 168.3 127 68.5
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.6e-39 166.4 116 65.5
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 1.6e-39 166.4 118 70.3
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.6e-39 166.4 116 68.1
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.1e-39 166.0 117 68.4
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 2.1e-39 166.0 136 63.2
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 2.1e-39 166.0 116 72.4
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 6.0e-39 164.5 135 60.0
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 6.0e-39 164.5 124 70.2
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.7e-38 162.9 118 66.1
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 2.3e-38 162.5 121 65.3
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 3.9e-38 161.8 120 65.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.5e-37 159.1 133 60.9
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.3e-37 158.7 119 67.2
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 5.6e-37 157.9 119 67.2
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.8e-36 154.8 128 60.9
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.1e-35 153.7 117 68.4
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.4e-35 153.3 129 65.1
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 4.0e-35 151.8 117 66.7
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 5.3e-35 151.4 117 68.4
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 6.9e-35 151.0 128 59.4
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.0e-34 149.4 117 66.7
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.0e-34 149.4 117 66.7
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 2.6e-34 149.1 117 66.7
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 3.4e-34 148.7 117 66.7
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 7.6e-34 147.5 117 68.4
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 7.6e-34 147.5 117 68.4
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 7.6e-34 147.5 117 65.8
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.3e-33 146.7 117 65.8
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.7e-33 146.4 117 64.1
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 2.2e-33 146.0 117 66.7
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.1e-32 143.7 146 52.7
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 6.0e-31 137.9 123 58.5
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 5.6e-29 131.3 83 73.5
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 6.2e-28 127.9 118 56.8
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 1.4e-27 126.7 116 57.8
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 2.6e-26 122.5 127 53.5
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 2.9e-25 119.0 135 47.4
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 4.2e-24 115.2 126 48.4
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 6.7e-22 107.8 69 71.0
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 7.4e-21 104.4 80 63.8
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.2e-18 97.1 55 74.5
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.1e-15 86.3 141 33.3
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 6.7e-14 81.3 118 39.8
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.5e-13 80.1 75 61.3
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.6e-12 76.6 109 43.1
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 2.1e-12 76.3 48 68.8


User provided reference genes

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