Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 0.0e+00 1134.8 599 100.0
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 1.8e-156 557.0 677 49.6
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 7.0e-153 545.0 662 50.2
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 5.7e-147 525.4 666 49.1
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.1e-145 521.2 665 48.7
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.6e-144 517.3 667 48.6
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 7.7e-144 515.0 667 48.6
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 1.0e-143 514.6 667 47.7
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.1e-142 511.1 667 48.3
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 4.7e-141 505.8 664 47.6
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 2.3e-140 503.4 666 46.7
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 3.0e-140 503.1 663 46.5
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.2e-139 501.1 668 46.4
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 2.0e-139 500.4 661 47.8
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 4.4e-139 499.2 662 47.6
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 1.3e-138 497.7 668 46.3
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.7e-138 496.1 666 46.5
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 9.2e-137 491.5 662 47.0
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.0e-136 490.3 665 46.2
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 3.5e-136 489.6 662 46.8
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 3.5e-136 489.6 646 46.7
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.0e-135 488.0 664 45.3
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 2.3e-135 486.9 668 47.3
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.3e-135 486.9 665 46.2
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.3e-134 482.6 638 47.5
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 2.1e-133 480.3 667 45.7
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.1e-133 480.3 692 44.8
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 2.1e-133 480.3 692 44.8
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 4.7e-133 479.2 683 44.7
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 4.7e-133 479.2 680 45.0
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 8.0e-133 478.4 661 46.4
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 6.8e-132 475.3 626 47.3
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.3e-130 471.1 646 46.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.7e-130 470.7 649 46.1
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 4.9e-130 469.2 696 42.7
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 4.1e-129 466.1 692 43.4
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 3.5e-128 463.0 659 45.5
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 1.7e-127 460.7 665 44.7
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 3.9e-127 459.5 672 44.5
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 5.0e-127 459.1 629 46.6
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.9e-126 457.2 636 45.8
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 1.6e-125 454.1 659 44.8
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 2.1e-125 453.8 660 43.9
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 2.8e-125 453.4 658 45.4
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.8e-125 453.4 726 42.0
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 3.6e-125 453.0 663 43.3
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 6.2e-125 452.2 683 43.3
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 1.1e-124 451.4 656 44.5
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 5.2e-124 449.1 664 42.9
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 6.8e-124 448.7 660 43.8
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 8.9e-124 448.4 643 45.4
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.5e-123 447.6 661 43.4
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.2e-122 443.7 690 43.0
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.4e-121 441.0 662 43.7
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 2.7e-120 436.8 626 44.7
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 6.6e-119 432.2 541 47.1
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 5.6e-118 429.1 643 42.5
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.0e-116 422.9 808 38.5
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 2.9e-114 416.8 661 40.5
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 4.1e-113 412.9 656 41.3
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 3.0e-111 406.8 767 38.5
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 4.3e-110 402.9 680 41.2
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 7.3e-110 402.1 662 40.3
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 1.6e-109 401.0 660 39.7
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 6.2e-109 399.1 665 39.2
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 4.0e-108 396.4 641 41.8
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 8.9e-108 395.2 657 39.7
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 1.5e-107 394.4 660 39.4
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 2.0e-107 394.0 676 39.3
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.4e-107 393.3 612 41.7
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 3.4e-107 393.3 649 40.8
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 5.8e-107 392.5 611 41.4
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 9.9e-107 391.7 656 40.4
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 1.7e-106 391.0 660 38.9
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 4.6e-104 382.9 688 37.9
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.0e-103 381.7 655 39.8
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.0e-103 381.7 688 37.9
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 3.0e-103 380.2 634 41.6
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 3.0e-103 380.2 540 45.0
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 9.6e-102 375.2 672 39.9
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 4.8e-101 372.9 688 37.5
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.1e-100 371.7 810 36.3
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 2.4e-100 370.5 688 37.5
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 5.3e-100 369.4 415 50.6
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 2.0e-99 367.5 711 36.7
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 8.4e-98 362.1 711 36.6
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 2.4e-97 360.5 670 40.1
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 5.4e-97 359.4 665 37.1
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 2.7e-96 357.1 447 49.9
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 5.3e-92 342.8 489 43.6
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 9.0e-92 342.0 474 43.9
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 3.8e-90 336.7 639 36.5
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 2.1e-88 330.9 606 37.8
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.0e-87 328.6 670 36.6
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.8e-84 317.8 653 35.8
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.1e-80 304.3 157 99.4
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 8.2e-77 292.4 648 36.1
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 5.5e-73 279.6 150 100.0
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 7.9e-72 275.8 536 36.9
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.4e-65 255.0 227 62.1
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 2.8e-61 240.7 499 36.5
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.1e-57 228.8 510 33.1
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 4.2e-57 226.9 462 36.4
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 2.3e-55 221.1 505 32.5
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 3.0e-55 220.7 165 72.1
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 3.7e-53 213.8 514 32.3
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 8.2e-53 212.6 422 36.3
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.4e-52 211.8 227 56.4
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.6e-46 191.0 152 67.8
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.9e-42 177.6 96 99.0
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.4e-36 157.9 225 43.6
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 6.1e-32 143.3 232 43.1
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 2.0e-30 138.3 240 37.1
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 4.4e-30 137.1 224 41.1
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 1.7e-29 135.2 815 23.1
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 2.5e-25 121.3 101 64.4
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 7.3e-25 119.8 221 40.7
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 6.1e-24 116.7 174 43.1
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 8.9e-23 112.8 78 74.4
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 3.2e-20 104.4 181 37.0
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 7.8e-19 99.8 91 67.0
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.7e-18 98.6 140 49.3
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.3e-17 94.4 90 67.8
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.7e-13 82.0 52 75.0
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 2.7e-11 74.7 252 31.0
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 5.6e-09 67.0 47 74.5
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 4.7e-08 63.9 88 43.2


User provided reference genes

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