Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.4e-84 315.5 161 100.0
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.1e-81 306.6 157 99.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 6.5e-21 104.8 221 35.3
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 5.5e-20 101.7 227 32.2
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 8.8e-18 94.4 227 33.9
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 4.4e-17 92.0 100 48.0
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 4.4e-17 92.0 227 31.3
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 4.4e-17 92.0 100 47.0
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 6.3e-16 88.2 220 27.7
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 2.4e-15 86.3 102 49.0
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 3.1e-15 85.9 103 44.7
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 6.9e-15 84.7 109 42.2
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.5e-14 83.6 100 45.0
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.6e-14 82.8 227 30.4
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 3.4e-14 82.4 100 44.0
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.9e-14 81.6 77 51.9
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 5.9e-14 81.6 100 48.0
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 5.9e-14 81.6 116 41.4
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.0e-13 80.9 121 38.8
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.3e-13 80.5 156 34.6
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.3e-13 80.5 77 53.2
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.7e-13 80.1 116 40.5
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 1.7e-13 80.1 109 42.2
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 2.2e-13 79.7 109 42.2
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 2.9e-13 79.3 226 29.2
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 5.0e-13 78.6 77 50.6
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.0e-13 78.6 77 50.6
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.1e-12 77.4 102 42.2
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.1e-12 77.4 77 53.2
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 1.1e-12 77.4 77 53.2
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.4e-12 77.0 99 47.5
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.4e-12 77.0 77 53.2
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.4e-12 77.0 109 45.9
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.9e-12 76.6 102 48.0
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.5e-12 76.3 109 39.4
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 2.5e-12 76.3 109 44.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 2.5e-12 76.3 109 44.0
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 3.2e-12 75.9 100 45.0
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.2e-12 75.5 86 50.0
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 4.2e-12 75.5 109 43.1
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 4.2e-12 75.5 100 42.0
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 5.5e-12 75.1 102 46.1
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 7.2e-12 74.7 100 44.0
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 9.4e-12 74.3 100 46.0
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 9.4e-12 74.3 98 45.9
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 9.4e-12 74.3 102 45.1
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 9.4e-12 74.3 102 45.1
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.2e-11 73.9 100 45.0
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 1.6e-11 73.6 98 49.0
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.6e-11 73.6 109 45.9
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 2.1e-11 73.2 76 48.7
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.7e-11 72.8 102 41.2
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 3.6e-11 72.4 109 42.2
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 3.6e-11 72.4 100 44.0
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 4.7e-11 72.0 106 44.3
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 8.0e-11 71.2 117 40.2
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 8.0e-11 71.2 100 42.0
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 8.0e-11 71.2 100 44.0
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 8.0e-11 71.2 77 46.8
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.0e-10 70.9 78 47.4
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 1.4e-10 70.5 100 42.0
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.0e-10 69.3 76 50.0
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 3.0e-10 69.3 101 43.6
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 3.9e-10 68.9 98 42.9
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 5.2e-10 68.6 101 38.6
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.1e-09 67.4 117 39.3
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.1e-09 67.4 117 39.3
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 2.6e-09 66.2 77 48.1
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 2.6e-09 66.2 77 48.1
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 3.3e-09 65.9 89 40.4
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.4e-09 65.5 133 36.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.4e-09 65.5 146 35.6
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 9.7e-09 64.3 109 39.4
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 2.8e-08 62.8 71 49.3
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 4.8e-08 62.0 100 37.0
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 1.2e-06 57.4 71 50.7
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 3.5e-06 55.8 67 44.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 4.5e-06 55.5 77 37.7
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 5.9e-06 55.1 71 47.9
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 7.7e-06 54.7 72 41.7


User provided reference genes

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