Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0006290 Simmondsia chinensis HOM05D007970 ORTHO05D009943 8.6e-77 290.4 166 100.0
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 4.2e-15 85.5 93 49.5
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 8.8e-13 77.8 104 43.3
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 8.8e-13 77.8 93 45.2
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 8.8e-13 77.8 104 43.3
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 1.5e-12 77.0 79 48.1
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 2.0e-12 76.6 127 38.6
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 3.3e-12 75.9 93 49.5
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 3.3e-12 75.9 86 50.0
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 4.3e-12 75.5 91 42.9
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 5.7e-12 75.1 110 44.5
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.3e-11 73.9 93 44.1
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.3e-11 73.9 93 43.0
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 4.8e-11 72.0 121 38.8
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 1.1e-10 70.9 81 43.2
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 1.4e-10 70.5 81 43.2
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 1.8e-10 70.1 79 44.3
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 3.1e-10 69.3 107 40.2
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 5.3e-10 68.6 86 44.2
Sc08g0002710 Simmondsia chinensis HOM05D007970 ORTHO05D009943 2.0e-09 66.6 82 42.7
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.6e-09 66.2 85 45.9
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 2.6e-09 66.2 80 47.5
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 2.6e-09 66.2 74 47.3
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 2.6e-09 66.2 74 47.3
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 5.9e-09 65.1 96 42.7
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 5.9e-09 65.1 74 47.3
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 7.7e-09 64.7 86 46.5
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.0e-08 64.3 116 37.1
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.0e-08 64.3 116 37.1
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 1.3e-08 63.9 118 44.1
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.7e-08 63.5 74 48.6
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.7e-08 63.5 85 42.4
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 2.2e-08 63.2 80 43.8
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.9e-08 62.8 91 40.7
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 2.9e-08 62.8 80 43.8
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 5.0e-08 62.0 105 39.0
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.5e-08 61.6 119 33.6
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 6.5e-08 61.6 118 37.3
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 6.5e-08 61.6 64 46.9
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 6.5e-08 61.6 73 52.1
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 8.5e-08 61.2 74 45.9
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 8.5e-08 61.2 83 41.0
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 8.5e-08 61.2 80 41.2
Lsat_1_v5_gn_6_35120 Lactuca sativa HOM05D006872 ORTHO05D006261 1.9e-07 60.1 74 47.3
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.9e-07 60.1 123 35.8
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.5e-07 59.7 97 37.1
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.5e-07 59.7 97 37.1
Lsat_1_v5_gn_2_55301 Lactuca sativa HOM05D006872 ORTHO05D006261 2.5e-07 59.7 74 45.9
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 3.2e-07 59.3 81 44.4
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 5.5e-07 58.5 114 37.7
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 9.4e-07 57.8 81 42.0
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 1.2e-06 57.4 80 42.5
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 1.2e-06 57.4 84 42.9
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 1.6e-06 57.0 88 39.8
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.6e-06 57.0 79 39.2
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 2.1e-06 56.6 81 43.2
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 2.7e-06 56.2 75 44.0
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.7e-06 56.2 79 39.2
MBI17_g00990_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 2.7e-06 56.2 116 36.2
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 2.7e-06 56.2 108 34.3
BcaB01g05730 Brassica carinata HOM05D010494 ORTHO05D006261 3.6e-06 55.8 85 36.5
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.6e-06 55.8 135 32.6
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 4.7e-06 55.5 79 39.2
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 6.1e-06 55.1 108 35.2
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 6.1e-06 55.1 81 40.7
Lsat_1_v5_gn_5_87380 Lactuca sativa HOM05D006872 ORTHO05D006261 6.1e-06 55.1 74 41.9
HanXRQChr15g0494731 Helianthus annuus HOM05D006872 ORTHO05D006261 7.9e-06 54.7 74 43.2
Medtr1g112960 Medicago truncatula HOM05D007970 ORTHO05D009943 7.9e-06 54.7 65 49.2


User provided reference genes

Program Settings