Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0006250 Simmondsia chinensis HOM05D008303 ORTHO05D010386 1.4e-63 246.1 129 100.0
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 2.0e-17 92.8 129 43.4
Ah.01g023280 Amaranthus hybridus HOM05D008303 ORTHO05D010386 5.9e-17 91.3 129 41.9
AUR62010007 Chenopodium quinoa HOM05D008303 ORTHO05D010386 3.0e-16 89.0 131 41.2
EL10Ac9g21335 Beta vulgaris HOM05D008303 ORTHO05D010386 1.5e-15 86.7 132 40.2
AUR62012998 Chenopodium quinoa HOM05D008303 ORTHO05D010386 7.3e-15 84.3 133 42.1
Potri.009G138700 Populus trichocarpa HOM05D008303 ORTHO05D010386 8.0e-14 80.9 133 45.1
Thecc.02G054500 Theobroma cacao HOM05D008303 ORTHO05D010386 1.8e-13 79.7 125 46.4
COL.COLO4_36725 Corchorus olitorius HOM05D008303 ORTHO05D010386 4.0e-13 78.6 126 42.9
Potri.004G178500 Populus trichocarpa HOM05D008303 ORTHO05D010386 5.2e-13 78.2 129 43.4
COL.COLO4_36726 Corchorus olitorius HOM05D008303 ORTHO05D010386 2.0e-12 76.3 126 42.9
Manes.04G070500 Manihot esculenta HOM05D008303 ORTHO05D010386 2.0e-12 76.3 134 41.0
Ah.01g008130 Amaranthus hybridus HOM05D008303 ORTHO05D010386 7.5e-12 74.3 130 36.9
EL10Ac9g21334 Beta vulgaris HOM05D008303 ORTHO05D010386 7.5e-12 74.3 135 37.8
Manes.04G070400 Manihot esculenta HOM05D008303 ORTHO05D010386 1.3e-11 73.6 137 40.1
Sabra09G0107400 Salix brachista HOM05D008303 ORTHO05D010386 1.3e-11 73.6 127 44.1
Gorai.005G255400 Gossypium raimondii HOM05D008303 ORTHO05D010386 3.7e-11 72.0 133 39.1
Sabra04G0120100 Salix brachista HOM05D008303 ORTHO05D010386 3.7e-11 72.0 129 42.6
Aqoxy5G01096 Aquilegia oxysepala HOM05D008303 ORTHO05D010386 4.9e-11 71.6 134 43.3
Gohir.A03G206100 Gossypium hirsutum HOM05D008303 ORTHO05D010386 4.9e-11 71.6 133 38.3
Gohir.D02G227500 Gossypium hirsutum HOM05D008303 ORTHO05D010386 4.9e-11 71.6 132 39.4
Migut.B00055 Erythranthe guttata HOM05D008303 ORTHO05D010386 5.4e-10 68.2 128 36.7
Nn6g31905 Nelumbo nucifera HOM05D008303 ORTHO05D010386 4.6e-09 65.1 145 35.9
Ciclev10030089m.g Citrus clementina HOM05D008303 ORTHO05D010386 6.0e-09 64.7 141 34.8
Gorai.002G200800 Gossypium raimondii HOM05D008303 ORTHO05D010386 7.8e-09 64.3 131 35.1
Rhsim11G0193900 Rhododendron simsii HOM05D008303 ORTHO05D010386 7.8e-09 64.3 129 38.8
Cfa005292 Carpinus fangiana HOM05D008303 ORTHO05D010386 1.0e-08 63.9 126 37.3
SGA_v2.0_scaffold58G20342 Striga asiatica HOM05D008303 ORTHO05D010386 3.0e-08 62.4 131 35.9
CiPaw.06G120000 Carya illinoinensis HOM05D008303 ORTHO05D010386 5.0e-08 61.6 140 35.0
Haze_02095 Corylus avellana HOM05D008303 ORTHO05D010386 8.6e-08 60.8 127 37.8
Gohir.D01G161900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 8.6e-08 60.8 133 34.6
QL11p052465 Quercus lobata HOM05D008303 ORTHO05D010386 8.6e-08 60.8 126 37.3
Gohir.A01G170900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 1.5e-07 60.1 133 34.6
QL11p052446 Quercus lobata HOM05D008303 ORTHO05D010386 1.5e-07 60.1 97 39.2
Prupe.8G169600 Prunus persica HOM05D008303 ORTHO05D010386 5.6e-07 58.2 81 40.7
Dinv14130 Davidia involucrata HOM05D001535 ORTHO05D003710 7.3e-07 57.8 84 44.0
Migut.N01334 Erythranthe guttata HOM05D008303 ORTHO05D010386 7.3e-07 57.8 118 37.3
arahy.Tifrunner.gnm1.ann1.DC2STY Arachis hypogaea HOM05D008303 ORTHO05D010386 1.2e-06 57.0 110 34.5
Oeu015521.1 Olea europaea HOM05D008303 ORTHO05D010386 2.8e-06 55.8 132 36.4
CsaV3_7G001230 Cucumis sativus L. HOM05D008303 ORTHO05D010386 4.7e-06 55.1 104 42.3


User provided reference genes

Program Settings