Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 3.9e-190 667.9 323 100.0
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.4e-110 403.7 293 65.2
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.4e-110 403.7 294 64.3
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.3e-109 399.1 294 64.3
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 7.0e-107 391.3 293 64.2
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 2.0e-106 389.8 296 62.2
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 3.5e-106 389.0 292 64.0
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 4.5e-106 388.7 292 63.7
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 5.9e-106 388.3 289 64.0
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.0e-105 387.5 288 63.9
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.3e-105 387.1 292 63.7
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 3.8e-105 385.6 297 62.0
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 6.5e-105 384.8 288 63.5
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.5e-104 383.6 288 63.5
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 9.4e-104 380.9 291 61.5
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 9.4e-104 380.9 292 61.0
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 1.8e-102 376.7 292 59.9
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 5.2e-102 375.2 284 60.9
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 2.0e-101 373.2 294 58.8
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 2.6e-101 372.9 296 60.1
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 2.6e-101 372.9 292 61.0
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 2.2e-100 369.8 278 62.6
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 3.7e-100 369.0 303 59.1
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 6.3e-100 368.2 288 61.8
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 1.1e-99 367.5 295 60.3
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 1.8e-99 366.7 302 58.9
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 4.1e-99 365.5 293 61.1
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 4.1e-99 365.5 294 58.2
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 5.3e-99 365.2 303 58.4
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 1.2e-98 364.0 293 58.4
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 3.5e-98 362.5 295 60.3
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 7.7e-98 361.3 296 60.8
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 1.3e-97 360.5 291 60.5
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 2.2e-97 359.8 321 54.8
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 3.8e-97 359.0 284 59.2
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 8.5e-97 357.8 291 58.1
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.5e-96 357.1 295 58.6
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.5e-96 357.1 305 56.1
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 2.5e-96 356.3 289 57.4
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 3.2e-96 355.9 286 57.3
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 7.2e-96 354.8 284 57.7
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 7.2e-96 354.8 294 60.2
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 2.1e-95 353.2 293 58.7
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 8.0e-95 351.3 291 60.1
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.4e-94 350.5 294 57.8
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 1.5e-93 347.1 311 55.3
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 2.0e-93 346.7 290 56.6
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 4.4e-93 345.5 295 57.6
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 4.4e-93 345.5 299 56.5
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 5.7e-93 345.1 286 59.1
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 5.7e-93 345.1 256 64.5
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 9.8e-93 344.4 273 62.3
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.3e-92 344.0 300 57.0
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 1.7e-92 343.6 295 55.9
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 2.8e-92 342.8 295 57.3
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 8.3e-92 341.3 295 57.3
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 8.3e-92 341.3 298 56.0
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 8.3e-92 341.3 292 56.8
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 4.1e-91 339.0 300 57.7
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 5.4e-91 338.6 292 55.8
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 5.4e-91 338.6 299 55.5
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 9.1e-91 337.8 301 55.1
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.9e-89 332.8 301 57.8
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 1.5e-88 330.5 301 56.1
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 1.5e-88 330.5 330 51.5
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 1.9e-88 330.1 289 54.7
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 2.5e-88 329.7 299 54.8
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 3.2e-88 329.3 289 55.0
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 4.2e-88 328.9 297 54.5
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 5.5e-88 328.6 290 55.2
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 9.5e-88 327.8 294 51.7
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 1.0e-86 324.3 288 55.2
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 1.8e-86 323.6 289 54.7
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 4.4e-85 318.9 281 56.2
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 4.4e-85 318.9 299 54.2
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 5.7e-85 318.5 300 54.7
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 2.8e-84 316.2 317 51.1
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 6.3e-84 315.1 295 53.2
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 7.0e-83 311.6 292 53.8
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 7.8e-82 308.1 291 54.0
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.1e-80 304.3 292 53.8
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 1.5e-80 303.9 293 53.2
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.5e-80 303.9 293 53.2
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.5e-80 303.9 292 53.4
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 4.0e-78 295.8 213 64.3
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 2.6e-77 293.1 236 59.7
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 4.4e-77 292.4 295 50.8
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 2.4e-75 286.6 287 50.5
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 5.4e-75 285.4 249 57.4
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 3.5e-74 282.7 275 53.8
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 1.7e-73 280.4 216 57.9
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 5.4e-59 232.3 314 41.7
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 9.2e-59 231.5 312 40.1
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 6.6e-49 198.7 303 37.0
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 2.4e-46 190.3 163 57.1
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.6e-45 186.8 158 58.2
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 4.4e-45 186.0 297 35.4
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 4.3e-40 169.5 220 40.9
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 7.3e-40 168.7 166 52.4
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 2.2e-36 157.1 300 32.7
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.1e-31 140.6 123 57.7
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 3.7e-31 139.8 147 51.0
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 1.7e-28 131.0 100 62.0
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 2.1e-26 124.0 83 69.9
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.6e-23 114.4 134 47.8
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 6.2e-23 112.5 305 29.5
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 9.0e-22 108.6 91 59.3
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 2.8e-15 87.0 272 27.9


User provided reference genes

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