Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0005230 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.2e-145 520.0 311 100.0
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 2.7e-79 299.7 330 61.5
Sc07g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 5.8e-34 149.1 189 48.7
Sc04g0003740 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.3e-21 106.7 116 56.9
Sc22g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 2.2e-17 94.0 57 78.9
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.7e-15 87.0 285 28.4
Sc03g0005370 Simmondsia chinensis HOM05D009343 ORTHO05D000385 3.5e-15 86.7 77 58.4
Sc06g0003990 Simmondsia chinensis HOM05D004615 ORTHO05D000385 1.8e-14 84.3 57 70.2
Sc05g0004900 Simmondsia chinensis HOM05D010414 ORTHO05D000385 6.7e-14 82.4 90 52.2
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 8.7e-14 82.0 118 41.5
Sc20g0003820 Simmondsia chinensis HOM05D004615 ORTHO05D000385 1.1e-13 81.6 58 65.5
Sc08g0005150 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.9e-13 80.9 88 52.3
Sc08g0005160 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.9e-13 80.9 52 76.9
Sc11g0005930 Simmondsia chinensis HOM05D010414 ORTHO05D000385 7.4e-13 79.0 71 59.2
Sc09g0007350 Simmondsia chinensis HOM05D009343 ORTHO05D000385 4.8e-12 76.3 79 49.4
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.5e-10 69.7 73 45.2
Sc22g0004480 Simmondsia chinensis HOM05D014970 ORTHO05D000385 5.8e-10 69.3 174 35.6
Sc02g0004540 Simmondsia chinensis HOM05D010414 ORTHO05D000385 7.6e-10 68.9 53 66.0
Hund03863 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.3e-09 68.2 139 34.5
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 1.3e-09 68.2 119 36.1
AUR62041732 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.7e-09 67.8 139 38.1
Sc19g0006200 Simmondsia chinensis HOM05D010414 ORTHO05D000385 2.2e-09 67.4 46 71.7
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.8e-09 66.6 120 39.2
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 8.4e-09 65.5 171 31.0
PGSC0003DMG400034515 Solanum tuberosum HOM05D008041 ORTHO05D000385 8.4e-09 65.5 205 28.3
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-08 65.1 168 31.0
AUR62036837 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.1e-08 65.1 135 34.1
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.9e-08 64.3 128 35.2
SGA_v2.0_scaffold528G52732 Striga asiatica HOM05D004615 ORTHO05D000385 2.5e-08 63.9 60 53.3
SGA_v2.0_scaffold279G46788 Striga asiatica HOM05D004615 ORTHO05D000385 4.2e-08 63.2 56 55.4
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 4.2e-08 63.2 56 55.4
Sc19g0006190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 5.5e-08 62.8 63 57.1
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 7.1e-08 62.4 151 33.1
AUR62025845 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-07 60.5 196 30.6
AUR62031112 Chenopodium quinoa HOM05D009343 ORTHO05D000385 2.7e-07 60.5 53 56.6
AUR62037174 Chenopodium quinoa HOM05D009343 ORTHO05D000385 2.7e-07 60.5 53 56.6
AUR62040355 Chenopodium quinoa HOM05D014060 ORTHO05D000385 2.7e-07 60.5 150 34.0
AUR62027608 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.5e-07 60.1 90 40.0
AUR62027663 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.5e-07 60.1 90 40.0
Sopen10g008660 Solanum pennellii HOM05D008041 ORTHO05D000385 3.5e-07 60.1 160 31.2
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 4.6e-07 59.7 93 39.8
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.0e-07 59.3 54 53.7
AUR62036502 Chenopodium quinoa HOM05D009343 ORTHO05D011970 6.0e-07 59.3 157 31.8
AUR62037194 Chenopodium quinoa HOM05D009343 ORTHO05D011970 7.9e-07 58.9 53 58.5
AUR62006471 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.0e-06 58.5 125 33.6
AUR62022305 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.0e-06 58.5 71 46.5
Sc11g0003700 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.0e-06 58.5 68 50.0
AUR62002779 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.8e-06 57.8 53 54.7
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.8e-06 57.8 60 48.3
AUR62043436 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.8e-06 57.8 160 33.1
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 2.3e-06 57.4 54 51.9
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-06 57.4 64 43.8
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.0e-06 57.0 54 51.9
Sc14g0005820 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.0e-06 57.0 58 44.8
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 3.9e-06 56.6 54 51.9
AUR62002100 Chenopodium quinoa HOM05D009343 ORTHO05D011970 5.1e-06 56.2 55 50.9
AUR62032537 Chenopodium quinoa HOM05D009343 ORTHO05D011970 5.1e-06 56.2 92 41.3
SGA_v2.0_scaffold11G05529 Striga asiatica HOM05D004615 ORTHO05D000385 5.1e-06 56.2 127 30.7
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.7e-06 55.8 71 43.7
Psat0s130g0040 Pisum sativum HOM05D008859 ORTHO05D000385 6.7e-06 55.8 50 50.0
AUR62022712 Chenopodium quinoa HOM05D009343 ORTHO05D000385 8.7e-06 55.5 112 33.9
AUR62037964 Chenopodium quinoa HOM05D014060 ORTHO05D000385 8.7e-06 55.5 103 35.9
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 8.7e-06 55.5 86 36.0


User provided reference genes

Program Settings