Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 4.2e-116 421.4 215 100.0
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 5.0e-69 265.0 225 62.2
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.9e-68 263.1 222 60.4
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 4.0e-66 255.4 216 62.5
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 4.4e-65 251.9 187 63.6
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 4.1e-63 245.4 189 67.2
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 1.6e-62 243.4 200 64.5
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 2.7e-62 242.7 183 65.0
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 1.1e-60 237.3 209 57.9
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 2.5e-60 236.1 183 61.7
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 9.5e-60 234.2 205 59.0
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 9.5e-60 234.2 211 57.8
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 9.5e-60 234.2 168 65.5
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 9.5e-60 234.2 209 58.9
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 1.2e-59 233.8 209 59.3
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 1.2e-59 233.8 202 58.4
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 2.1e-59 233.0 181 62.4
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 2.1e-59 233.0 206 58.3
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 2.8e-59 232.6 213 56.8
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 2.8e-59 232.6 171 64.9
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 4.7e-59 231.9 183 61.2
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 4.7e-59 231.9 183 63.9
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 6.1e-59 231.5 204 56.4
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 6.1e-59 231.5 184 60.9
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.0e-58 230.7 183 61.2
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.0e-58 230.7 183 63.4
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.0e-58 230.7 202 57.9
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.4e-58 230.3 200 59.5
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.8e-58 229.9 183 62.3
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.8e-58 229.9 209 58.4
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.8e-58 229.9 210 57.1
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 2.3e-58 229.6 183 61.7
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 2.3e-58 229.6 204 55.4
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 3.0e-58 229.2 183 63.4
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 4.0e-58 228.8 207 57.5
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 5.2e-58 228.4 198 57.6
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 8.9e-58 227.6 182 62.6
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.2e-57 227.3 204 56.9
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 1.2e-57 227.3 205 56.6
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 2.0e-57 226.5 204 56.4
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.0e-57 226.5 211 57.3
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 3.4e-57 225.7 195 59.0
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 3.4e-57 225.7 212 55.2
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 3.4e-57 225.7 198 59.1
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 4.4e-57 225.3 209 56.5
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 5.7e-57 224.9 172 64.0
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 7.5e-57 224.6 180 58.9
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 9.8e-57 224.2 166 63.3
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.7e-56 223.4 199 58.3
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.2e-56 223.0 170 62.4
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 2.2e-56 223.0 213 54.0
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 2.9e-56 222.6 197 59.9
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 4.9e-56 221.9 198 58.1
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 8.3e-56 221.1 181 59.7
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 8.3e-56 221.1 207 56.0
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.1e-55 220.7 179 57.0
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.8e-55 219.9 215 55.8
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.8e-55 219.9 207 56.5
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.8e-55 219.9 171 59.6
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 2.4e-55 219.5 214 55.6
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 2.4e-55 219.5 200 56.0
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 3.2e-55 219.2 175 59.4
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 4.1e-55 218.8 180 58.9
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 5.4e-55 218.4 182 58.8
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 5.4e-55 218.4 182 58.8
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 5.4e-55 218.4 182 58.8
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 5.4e-55 218.4 175 60.6
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 7.0e-55 218.0 179 57.5
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 7.0e-55 218.0 202 54.5
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 2.0e-54 216.5 219 56.2
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 2.0e-54 216.5 176 59.1
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 3.5e-54 215.7 172 62.2
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 4.6e-54 215.3 210 55.2
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 4.6e-54 215.3 202 54.5
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 5.9e-54 214.9 182 58.8
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 5.9e-54 214.9 163 60.7
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 7.8e-54 214.5 207 57.5
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.3e-53 213.8 228 51.3
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.7e-53 213.4 200 57.5
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.7e-53 213.4 178 57.9
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 2.3e-53 213.0 171 59.6
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 3.0e-53 212.6 182 58.2
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 3.9e-53 212.2 184 57.1
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 5.0e-53 211.8 205 54.1
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 5.0e-53 211.8 200 55.5
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 6.6e-53 211.5 175 57.1
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 1.1e-52 210.7 189 57.7
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.9e-52 209.9 193 58.5
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.5e-52 209.5 189 56.6
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 4.3e-52 208.8 210 51.4
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 6.2e-51 204.9 214 50.0
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.0e-50 204.1 209 50.7
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.8e-50 203.4 197 52.8
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 2.3e-50 203.0 169 60.4
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 6.8e-50 201.4 228 49.1
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 2.6e-49 199.5 209 49.8
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.4e-49 199.1 199 49.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 4.9e-48 195.3 201 53.2
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 6.4e-48 194.9 154 59.1
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 1.4e-47 193.7 200 52.0
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 2.4e-47 193.0 217 49.8
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 6.8e-42 174.9 197 47.7
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 8.6e-37 157.9 221 44.3
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.8e-34 150.2 125 64.0
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 8.4e-32 141.4 175 42.9
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.1e-31 141.0 194 41.2
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 4.1e-31 139.0 220 41.4
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 2.3e-29 133.3 175 42.9
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 3.0e-29 132.9 174 39.7
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 2.4e-26 123.2 204 37.3
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 3.4e-25 119.4 207 36.2
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 5.4e-23 112.1 75 72.0
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 5.1e-21 105.5 95 56.8
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 5.1e-21 105.5 182 33.0
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 4.3e-20 102.4 210 31.0
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 4.0e-18 95.9 183 31.7
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 2.0e-17 93.6 146 39.7
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 2.4e-15 86.7 102 44.1
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 3.5e-14 82.8 107 41.1
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 2.0e-09 67.0 105 31.4
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 7.6e-09 65.1 225 27.1


User provided reference genes

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