Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 7.6e-239 830.1 421 100.0
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 9.2e-168 594.0 422 73.0
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.7e-166 589.7 403 74.2
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 8.6e-166 587.4 403 74.4
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 3.3e-165 585.5 403 73.9
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 3.6e-164 582.0 404 74.3
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 6.2e-164 581.3 414 73.2
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 2.0e-162 576.2 386 76.7
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 3.4e-162 575.5 421 71.0
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 1.3e-161 573.5 420 71.2
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 1.7e-161 573.2 420 70.0
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 1.7e-161 573.2 401 74.3
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 2.2e-161 572.8 402 73.6
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 3.8e-161 572.0 406 70.9
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 3.8e-161 572.0 415 71.3
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 4.9e-161 571.6 430 69.1
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 1.4e-160 570.1 422 72.0
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.4e-160 570.1 387 74.4
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 1.9e-160 569.7 417 69.5
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 9.2e-160 567.4 414 72.0
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 2.7e-159 565.8 414 71.5
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 5.1e-158 561.6 424 70.0
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.9e-157 559.7 402 70.6
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 4.3e-157 558.5 386 74.4
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 5.6e-157 558.1 402 71.1
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 1.2e-156 557.0 377 73.5
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 1.2e-156 557.0 383 73.4
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 1.4e-155 553.5 419 68.5
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 2.4e-155 552.7 413 67.3
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 3.1e-155 552.4 432 67.4
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 4.0e-155 552.0 389 72.8
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 6.9e-155 551.2 421 68.2
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 9.0e-155 550.8 420 68.3
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 1.5e-154 550.1 371 74.1
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 4.4e-154 548.5 403 69.0
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 5.8e-154 548.1 415 68.4
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 7.6e-154 547.7 406 69.7
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.3e-153 547.0 400 69.8
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 2.2e-153 546.2 397 70.0
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 3.8e-153 545.4 409 69.9
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 6.4e-153 544.7 421 67.9
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 6.4e-153 544.7 414 70.8
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 1.9e-152 543.1 409 68.9
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 1.9e-152 543.1 418 69.6
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 1.9e-152 543.1 432 65.0
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 3.2e-152 542.3 421 67.5
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 3.2e-152 542.3 422 67.8
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 4.2e-152 542.0 418 67.9
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 9.3e-152 540.8 381 71.7
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.7e-151 539.3 394 69.3
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 3.5e-151 538.9 411 68.1
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 3.5e-151 538.9 401 70.1
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 6.0e-151 538.1 385 70.4
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 6.0e-151 538.1 390 70.3
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.0e-150 537.3 378 72.8
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 1.3e-150 537.0 391 70.3
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 1.3e-150 537.0 428 67.3
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 6.6e-150 534.6 421 66.3
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 6.6e-150 534.6 421 66.5
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 8.7e-150 534.3 421 68.2
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 1.5e-149 533.5 317 79.8
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.5e-149 532.7 419 65.9
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 2.5e-149 532.7 380 71.3
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 4.3e-149 531.9 383 71.0
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 4.3e-149 531.9 389 71.2
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 5.6e-149 531.6 409 66.3
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 7.3e-149 531.2 375 72.3
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 9.6e-149 530.8 402 68.9
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 9.6e-149 530.8 435 65.3
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.3e-148 530.4 405 65.9
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 2.1e-148 529.6 383 70.5
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 2.1e-148 529.6 402 68.2
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 3.6e-148 528.9 370 72.7
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 3.6e-148 528.9 433 64.2
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 4.8e-148 528.5 424 65.1
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 8.1e-148 527.7 397 69.3
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 1.4e-147 526.9 429 65.5
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.4e-147 526.2 424 64.6
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 3.1e-147 525.8 380 69.7
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 5.3e-147 525.0 416 65.1
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 6.9e-147 524.6 405 65.4
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 1.2e-146 523.9 363 71.9
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.2e-146 523.9 325 77.8
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 1.2e-146 523.9 325 76.9
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.6e-146 522.7 376 71.3
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 2.2e-145 519.6 301 82.7
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 3.8e-145 518.8 379 69.9
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 4.9e-145 518.5 344 75.0
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 1.1e-144 517.3 322 76.7
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 1.9e-144 516.5 422 64.2
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.9e-144 516.5 322 77.0
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.4e-144 516.2 370 71.4
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 5.4e-144 515.0 360 72.2
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 5.4e-144 515.0 322 77.6
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.6e-143 511.9 408 65.2
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 5.6e-141 505.0 513 55.6
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 2.6e-138 496.1 388 66.2
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.7e-137 493.4 322 74.5
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.1e-123 447.6 371 61.2
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 1.0e-121 441.0 347 69.2
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 2.2e-121 439.9 252 84.1
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 2.1e-111 406.8 291 68.0
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.9e-104 383.6 369 52.8
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 5.7e-101 372.1 345 53.3
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 9.4e-96 354.8 427 45.4
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 2.7e-95 353.2 254 72.0
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 3.1e-91 339.7 314 54.8
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 5.9e-90 335.5 343 51.3
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 5.7e-85 318.9 215 74.4
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.6e-82 310.8 314 57.0
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 8.6e-81 305.1 320 54.7
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 1.5e-80 304.3 254 63.0
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 9.5e-80 301.6 319 55.2
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 8.9e-78 295.0 383 48.0
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 1.5e-77 294.3 381 47.2
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.5e-74 283.1 326 52.5
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 9.5e-72 275.0 169 77.5
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 4.1e-67 259.6 154 78.6
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 4.3e-64 249.6 296 45.6
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 6.2e-63 245.7 278 48.6
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 6.6e-49 199.1 209 56.5
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 2.4e-46 190.7 349 37.5
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.1e-35 155.2 133 60.9
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 1.4e-27 128.3 105 61.9
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.1e-22 112.1 142 43.7
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 9.0e-22 109.0 104 58.7
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 6.4e-20 102.8 58 75.9
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.0e-18 96.3 58 79.3
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.0e-12 79.0 128 41.4
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 2.5e-11 74.3 128 39.1
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 5.1e-09 66.6 139 41.0
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 1.5e-08 65.1 130 42.3
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 1.9e-08 64.7 100 49.0


User provided reference genes

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