Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 8.7e-105 383.6 193 100.0
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 5.0e-36 155.2 143 59.4
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 7.2e-35 151.4 98 71.4
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 9.5e-35 151.0 147 58.5
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 1.6e-34 150.2 142 58.5
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 2.8e-34 149.4 90 80.0
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 6.1e-34 148.3 128 64.1
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 2.3e-33 146.4 85 77.6
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 6.8e-33 144.8 86 76.7
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 8.9e-33 144.4 89 74.2
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 8.9e-33 144.4 88 76.1
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 2.6e-32 142.9 96 71.9
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 2.6e-32 142.9 88 77.3
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 3.4e-32 142.5 94 69.1
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 7.5e-32 141.4 136 58.1
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 2.8e-31 139.4 102 66.7
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 2.8e-31 139.4 157 51.0
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 3.7e-31 139.0 143 53.8
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 4.9e-31 138.7 93 67.7
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 4.9e-31 138.7 93 67.7
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 1.4e-30 137.1 95 66.3
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 1.4e-30 137.1 87 71.3
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 1.8e-30 136.7 108 63.9
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 1.8e-30 136.7 109 64.2
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 2.4e-30 136.3 87 70.1
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 2.4e-30 136.3 92 66.3
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 3.2e-30 136.0 95 69.5
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 3.2e-30 136.0 123 53.7
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 4.1e-30 135.6 93 66.7
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 4.1e-30 135.6 94 66.0
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 5.4e-30 135.2 145 49.7
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 5.4e-30 135.2 93 66.7
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 5.4e-30 135.2 93 65.6
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 7.0e-30 134.8 130 57.7
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 9.2e-30 134.4 93 67.7
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 1.2e-29 134.0 87 71.3
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 1.6e-29 133.7 94 68.1
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 2.7e-29 132.9 148 50.0
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 3.5e-29 132.5 151 47.0
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 3.5e-29 132.5 97 64.9
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 4.6e-29 132.1 90 70.0
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.9e-29 131.7 95 65.3
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 5.9e-29 131.7 95 64.2
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 5.9e-29 131.7 106 57.5
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 7.8e-29 131.3 80 75.0
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 7.8e-29 131.3 86 72.1
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.0e-28 131.0 116 55.2
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 1.0e-28 131.0 84 72.6
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 1.3e-28 130.6 92 65.2
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 2.9e-28 129.4 78 76.9
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 3.9e-28 129.0 87 69.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 8.6e-28 127.9 81 72.8
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 8.6e-28 127.9 77 71.4
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 1.5e-27 127.1 123 57.7
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 1.9e-27 126.7 136 50.0
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 3.3e-27 125.9 104 63.5
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 4.3e-27 125.6 105 62.9
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 7.3e-27 124.8 87 69.0
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.2e-26 124.0 81 71.6
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 4.7e-26 122.1 81 69.1
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 4.0e-25 119.0 88 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 8.9e-25 117.9 107 56.1
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 3.4e-24 115.9 138 47.1
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.3e-23 114.0 86 66.3
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 1.7e-23 113.6 97 54.6
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.1e-22 110.9 102 53.9
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 1.4e-22 110.5 93 58.1
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 2.4e-22 109.8 125 51.2
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 3.2e-22 109.4 68 75.0
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 4.1e-22 109.0 90 57.8
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.6e-21 107.1 104 52.9
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 3.5e-21 105.9 130 50.8
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.6e-21 105.5 104 51.9
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 4.6e-21 105.5 90 61.1
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 6.0e-21 105.1 82 59.8
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 6.0e-21 105.1 78 66.7
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 7.8e-21 104.8 64 75.0
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.0e-20 104.4 104 51.9
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 1.7e-20 103.6 127 48.0
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 3.0e-20 102.8 151 43.0
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 6.6e-20 101.7 137 47.4
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 1.1e-19 100.9 73 64.4
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 1.1e-19 100.9 73 64.4
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 2.5e-19 99.8 87 58.6
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 7.3e-19 98.2 130 43.1
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 6.2e-18 95.1 66 69.7
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 4.0e-17 92.4 70 64.3
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 3.7e-15 85.9 84 51.2
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 4.9e-15 85.5 81 55.6
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 2.4e-14 83.2 71 52.1
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 3.1e-09 66.2 96 41.7
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 5.2e-09 65.5 79 46.8
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 3.4e-08 62.8 57 57.9
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 3.4e-08 62.8 50 60.0
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 4.4e-08 62.4 93 45.2
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 4.1e-06 55.8 49 59.2
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 9.2e-06 54.7 104 37.5


User provided reference genes

Program Settings