Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 2.8e-70 268.5 133 100.0
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 2.9e-59 231.9 133 83.5
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 5.0e-59 231.1 133 83.5
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 6.5e-59 230.7 133 82.7
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.4e-58 229.6 133 85.0
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 82.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 4.2e-58 228.0 133 81.2
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 4.2e-58 228.0 133 84.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 4.2e-58 228.0 133 81.2
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 82.0
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 1.2e-57 226.5 134 82.8
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.6e-57 226.1 133 80.5
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 3.6e-57 224.9 133 81.2
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 6.1e-57 224.2 133 79.7
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 7.9e-57 223.8 133 82.7
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 1.0e-56 223.4 133 78.9
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.4e-56 223.0 132 81.1
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 79.7
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 79.7
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 79.7
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 79.7
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 3.9e-56 221.5 133 78.9
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 6.7e-56 220.7 133 81.2
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 6.7e-56 220.7 133 78.9
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.1e-55 219.9 131 80.2
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.1e-55 219.9 133 76.7
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.5e-55 219.5 132 82.6
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 3.3e-55 218.4 133 78.2
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.3e-55 218.4 140 77.9
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 4.3e-55 218.0 133 78.9
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 78.9
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 78.9
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 78.9
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 77.4
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.3e-54 216.5 132 78.0
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.2e-54 215.7 133 79.7
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 2.8e-54 215.3 133 78.2
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.8e-54 215.3 133 79.7
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 77.4
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 4.1e-53 211.5 134 78.4
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 4.1e-53 211.5 139 77.0
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.2e-52 209.9 127 76.4
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.5e-52 209.5 133 75.2
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 4.5e-52 208.0 133 74.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 2.2e-51 205.7 116 85.3
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 2.2e-51 205.7 133 74.4
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 6.5e-51 204.1 133 72.9
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.1e-49 199.1 113 81.4
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 4.7e-49 198.0 133 69.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 70.7
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 69.2
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 1.4e-48 196.4 176 58.5
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 1.8e-48 196.1 125 73.6
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 2.3e-48 195.7 133 71.4
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.9e-48 194.9 118 74.6
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 3.9e-48 194.9 133 68.4
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 6.7e-48 194.1 133 68.4
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 1.1e-47 193.4 133 67.7
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 1.1e-47 193.4 181 56.9
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 1.5e-47 193.0 115 76.5
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 69.2
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 5.7e-47 191.0 133 68.4
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 5.7e-47 191.0 133 69.9
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 67.7
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 9.7e-47 190.3 133 66.2
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.3e-46 189.9 133 66.9
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.7e-46 189.5 133 67.7
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.4e-45 185.7 133 65.4
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 3.5e-44 181.8 130 71.5
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 1.7e-43 179.5 136 63.2
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 2.9e-43 178.7 137 63.5
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 5.0e-43 177.9 114 73.7
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 8.5e-43 177.2 101 79.2
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.1e-42 176.8 105 77.1
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 1.0e-40 170.2 128 64.1
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 5.2e-40 167.9 103 73.8
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 5.2e-40 167.9 105 74.3
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 8.8e-40 167.2 105 71.4
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 8.8e-40 167.2 98 77.6
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 8.8e-40 167.2 128 62.5
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 2.6e-39 165.6 100 77.0
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 7.4e-39 164.1 98 79.6
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.3e-38 163.3 105 73.3
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.1e-37 160.2 124 58.1
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 2.0e-36 156.0 92 76.1
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 3.0e-32 142.1 125 52.8
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 1.5e-31 139.8 133 59.4
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 4.8e-30 134.8 110 52.7
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 8.3e-30 134.0 133 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.9e-26 122.9 142 45.1
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 8.0e-25 117.5 70 78.6
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.8e-21 106.3 102 49.0
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 3.1e-21 105.5 63 79.4
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.2e-20 103.6 111 46.8
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 5.9e-20 101.3 109 47.7
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 2.5e-18 95.9 67 65.7
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 5.5e-18 94.7 131 38.2
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 6.6e-11 71.2 73 45.2
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 8.6e-11 70.9 47 61.7
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 5.6e-10 68.2 68 51.5
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 6.1e-09 64.7 59 59.3
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 3.1e-08 62.4 88 38.6
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 2.6e-07 59.3 36 66.7
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 3.7e-06 55.5 34 61.8


User provided reference genes

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