Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 6.2e-88 327.4 161 100.0
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.8e-31 139.8 103 67.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.8e-31 139.8 103 67.0
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 9.0e-31 137.5 105 64.8
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 2.2e-29 132.9 87 74.7
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 5.0e-29 131.7 103 63.1
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 5.0e-29 131.7 100 65.0
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 5.0e-29 131.7 108 61.1
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 6.5e-29 131.3 87 73.6
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 8.5e-29 131.0 94 68.1
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-28 130.6 91 72.5
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.4e-28 130.2 89 71.9
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 2.5e-28 129.4 89 70.8
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 3.2e-28 129.0 126 54.0
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.2e-28 129.0 91 71.4
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 5.5e-28 128.3 88 70.5
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 9.3e-28 127.5 87 73.6
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 9.3e-28 127.5 105 60.0
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 3.6e-27 125.6 100 59.0
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 4.6e-27 125.2 89 68.5
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 4.6e-27 125.2 107 61.7
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 6.1e-27 124.8 92 65.2
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 7.9e-27 124.4 92 66.3
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 7.9e-27 124.4 89 66.3
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 1.3e-26 123.6 94 62.8
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 1.3e-26 123.6 88 65.9
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.8e-26 123.2 89 66.3
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.8e-26 123.2 103 58.3
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 1.8e-26 123.2 112 55.4
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 1.8e-26 123.2 87 70.1
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 2.3e-26 122.9 91 63.7
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 3.0e-26 122.5 90 66.7
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 3.0e-26 122.5 103 61.2
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 3.9e-26 122.1 90 66.7
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 5.1e-26 121.7 104 60.6
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 5.1e-26 121.7 87 69.0
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 6.7e-26 121.3 103 55.3
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 6.7e-26 121.3 114 56.1
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 6.7e-26 121.3 86 69.8
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 8.8e-26 120.9 101 60.4
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 8.8e-26 120.9 87 69.0
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 8.8e-26 120.9 100 62.0
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 8.8e-26 120.9 95 65.3
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 8.8e-26 120.9 100 62.0
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 1.1e-25 120.6 91 62.6
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 1.1e-25 120.6 91 64.8
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 1.1e-25 120.6 83 67.5
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 1.5e-25 120.2 104 58.7
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.9e-25 119.8 91 64.8
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.9e-25 119.8 96 59.4
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 1.9e-25 119.8 88 67.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 1.9e-25 119.8 88 67.0
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.9e-25 119.8 100 56.0
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 2.5e-25 119.4 96 60.4
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 2.5e-25 119.4 96 60.4
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 2.5e-25 119.4 96 60.4
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 2.5e-25 119.4 96 60.4
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 2.5e-25 119.4 96 60.4
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 2.5e-25 119.4 100 58.0
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 4.3e-25 118.6 82 65.9
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 4.3e-25 118.6 82 65.9
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 4.3e-25 118.6 83 66.3
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 5.7e-25 118.2 86 64.0
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 7.4e-25 117.9 93 59.1
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 7.4e-25 117.9 83 63.9
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 7.4e-25 117.9 86 65.1
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 7.4e-25 117.9 86 65.1
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 7.4e-25 117.9 86 65.1
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 7.4e-25 117.9 88 65.9
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 9.7e-25 117.5 103 58.3
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 9.7e-25 117.5 114 55.3
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 9.7e-25 117.5 104 58.7
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 9.7e-25 117.5 86 65.1
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 1.3e-24 117.1 86 65.1
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.7e-24 116.7 96 59.4
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.7e-24 116.7 87 63.2
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 1.7e-24 116.7 88 64.8
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.7e-24 116.7 87 64.4
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 1.7e-24 116.7 90 64.4
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.7e-24 116.7 86 67.4
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 2.2e-24 116.3 104 55.8
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 2.8e-24 115.9 102 53.9
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 3.7e-24 115.5 82 64.6
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 3.7e-24 115.5 104 57.7
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 6.3e-24 114.8 86 68.6
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 6.3e-24 114.8 87 65.5
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 1.1e-23 114.0 88 61.4
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.1e-23 114.0 86 67.4
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 1.1e-23 114.0 105 57.1
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.4e-23 113.6 83 67.5
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 1.4e-23 113.6 87 63.2
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 1.4e-23 113.6 96 56.2
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.8e-23 113.2 84 63.1
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 3.1e-23 112.5 88 62.5
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 4.1e-23 112.1 82 64.6
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.5e-22 110.2 84 61.9
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 3.4e-22 109.0 80 63.8
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 5.9e-22 108.2 77 67.5
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 1.7e-21 106.7 80 62.5
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 1.9e-20 103.2 90 58.9
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 2.5e-20 102.8 83 61.4
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 7.9e-19 97.8 90 56.7
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 3.0e-18 95.9 88 50.0
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 2.2e-16 89.7 86 45.3
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 6.3e-16 88.2 86 45.3
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 1.8e-15 86.7 99 46.5
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 3.1e-15 85.9 63 66.7
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 5.9e-14 81.6 108 41.7
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.2e-13 79.7 81 42.0
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.6e-11 73.6 68 51.5
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 3.6e-11 72.4 84 42.9
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 1.5e-09 67.0 84 44.0
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 2.2e-08 63.2 82 34.1
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 1.1e-07 60.8 80 35.0


User provided reference genes

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