Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.6e-77 292.7 152 100.0
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 7.4e-43 177.6 141 62.4
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.2e-39 166.0 146 61.6
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 5.5e-38 161.4 146 55.5
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 5.5e-38 161.4 150 56.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-37 160.2 152 55.3
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-37 160.2 150 56.0
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 2.7e-37 159.1 135 57.8
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.6e-37 158.7 133 60.2
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 8.8e-36 154.1 149 53.7
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.2e-35 153.7 129 59.7
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.5e-35 153.3 126 61.9
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 3.3e-35 152.1 153 52.9
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.2e-34 149.4 133 57.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.8e-34 149.1 148 54.1
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 2.8e-34 149.1 146 52.7
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 3.7e-34 148.7 126 59.5
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.3e-34 147.9 133 57.1
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 8.2e-34 147.5 140 55.7
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.1e-33 147.1 140 53.6
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.1e-33 147.1 127 56.7
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.1e-33 147.1 146 54.1
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.4e-33 146.7 140 52.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 3.1e-33 145.6 128 57.0
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 9.1e-33 144.1 131 54.2
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.6e-32 143.3 127 55.1
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.6e-32 143.3 144 51.4
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.0e-32 142.9 133 55.6
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.0e-32 142.9 133 55.6
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 2.0e-32 142.9 147 52.4
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 2.0e-32 142.9 127 58.3
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.7e-32 142.5 128 56.2
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.7e-32 142.5 143 49.7
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 2.7e-32 142.5 123 56.9
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 4.5e-32 141.7 135 57.0
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.0e-31 140.6 134 53.7
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.3e-31 140.2 130 56.2
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.3e-31 140.2 130 56.2
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.7e-31 139.8 128 56.2
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 5.0e-31 138.3 143 48.3
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.5e-30 136.7 129 54.3
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 2.5e-30 136.0 144 47.9
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.5e-30 136.0 123 58.5
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.2e-30 135.6 131 55.0
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.2e-30 135.2 123 55.3
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 5.5e-30 134.8 124 52.4
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 5.5e-30 134.8 163 47.9
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 7.2e-30 134.4 124 54.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 9.4e-30 134.0 142 51.4
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 9.4e-30 134.0 142 47.2
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.6e-29 133.3 132 50.8
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.6e-29 133.3 143 46.9
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.1e-29 132.9 123 52.8
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 2.1e-29 132.9 166 42.8
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.7e-29 132.5 142 50.0
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.7e-29 132.5 142 50.0
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 4.7e-29 131.7 124 54.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 8.0e-29 131.0 135 51.1
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.4e-28 130.2 135 50.4
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.8e-28 129.8 127 52.0
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 4.0e-28 128.6 135 50.4
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 4.0e-28 128.6 124 53.2
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 8.8e-28 127.5 127 52.0
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.0e-27 126.3 121 54.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.4e-27 125.6 153 45.8
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.4e-27 125.6 123 54.5
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 4.4e-27 125.2 132 50.0
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 9.8e-27 124.0 135 48.1
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.3e-26 123.6 124 48.4
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.2e-26 122.9 134 45.5
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.2e-26 122.9 135 48.1
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.8e-26 122.5 124 51.6
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 8.3e-26 120.9 135 45.9
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.4e-25 120.2 103 51.5
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 7.0e-25 117.9 115 51.3
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 7.0e-25 117.9 130 49.2
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.2e-24 117.1 146 43.2
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.3e-23 113.6 133 45.9
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 6.5e-23 111.3 146 43.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 8.5e-23 110.9 146 43.2
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 9.5e-22 107.5 147 43.5
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.2e-21 107.1 128 43.0
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.0e-20 104.0 146 40.4
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 2.3e-20 102.8 127 43.3
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 3.0e-20 102.4 127 44.1
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 3.0e-20 102.4 110 50.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.2e-19 100.5 107 46.7
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 3.7e-18 95.5 126 42.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 4.9e-18 95.1 124 43.5
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 7.0e-17 91.3 146 37.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.5e-16 89.0 140 35.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.5e-16 89.0 140 35.7
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 7.8e-16 87.8 146 32.9
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.7e-15 86.7 69 63.8
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.9e-15 85.9 134 36.6
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.9e-15 85.9 86 47.7
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 6.6e-15 84.7 128 36.7
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.1e-14 84.0 99 49.5
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 3.3e-14 82.4 81 48.1
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.2e-13 80.5 69 58.0
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.2e-13 80.5 111 36.9
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.8e-13 79.3 128 33.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 3.0e-12 75.9 72 48.6
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.2e-11 73.9 51 66.7
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.2e-11 73.9 127 33.1
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.6e-11 72.8 51 64.7
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 7.5e-11 71.2 144 36.8
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 9.2e-09 64.3 60 53.3
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 9.5e-06 54.3 75 38.7


User provided reference genes

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