Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.1e-122 443.4 230 100.0
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 6.0e-121 437.6 226 100.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.4e-101 373.2 218 84.9
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.0e-99 367.1 216 83.8
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 5.0e-99 364.8 223 82.5
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-95 353.6 217 80.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 4.4e-95 351.7 210 82.4
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 9.7e-95 350.5 221 77.8
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.3e-94 350.1 218 78.9
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.7e-94 349.7 224 75.0
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.7e-94 349.7 225 77.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.8e-94 349.0 208 82.2
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 3.7e-94 348.6 222 77.5
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 4.8e-94 348.2 210 81.4
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 6.3e-94 347.8 218 78.9
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 8.2e-94 347.4 218 79.4
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 8.2e-94 347.4 208 81.2
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.4e-93 346.7 219 77.2
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.4e-93 346.7 223 76.2
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 4.1e-93 345.1 213 79.3
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 4.1e-93 345.1 219 76.3
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 5.3e-93 344.7 210 80.5
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 5.3e-93 344.7 218 78.0
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 5.3e-93 344.7 208 79.8
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 9.1e-93 344.0 208 80.8
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 2.0e-92 342.8 211 80.1
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 2.0e-92 342.8 212 80.2
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.5e-92 342.0 207 79.7
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 3.5e-92 342.0 218 77.1
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 5.9e-92 341.3 218 78.0
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 5.9e-92 341.3 210 80.0
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 5.9e-92 341.3 218 77.1
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 7.7e-92 340.9 218 76.6
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 7.7e-92 340.9 225 74.7
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 7.7e-92 340.9 225 74.7
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.3e-91 340.1 229 74.2
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.3e-91 340.1 226 75.2
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.7e-91 339.7 225 74.7
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 2.2e-91 339.3 219 76.3
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 2.2e-91 339.3 219 76.3
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 3.8e-91 338.6 218 77.1
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 3.8e-91 338.6 225 75.1
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 3.8e-91 338.6 225 75.1
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 5.0e-91 338.2 219 76.3
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 5.0e-91 338.2 220 74.1
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 8.5e-91 337.4 227 74.4
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 8.5e-91 337.4 220 76.4
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.1e-90 337.0 230 73.0
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 1.1e-90 337.0 224 74.1
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.1e-90 337.0 218 75.7
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.1e-90 337.0 218 76.6
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 2.5e-90 335.9 219 76.3
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 3.2e-90 335.5 219 74.0
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 4.2e-90 335.1 246 70.3
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 4.2e-90 335.1 246 70.3
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.2e-90 335.1 203 80.3
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 5.5e-90 334.7 214 78.0
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 7.2e-90 334.3 218 75.7
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 9.4e-90 334.0 218 73.9
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.2e-89 333.6 222 74.8
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.6e-89 333.2 208 78.4
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 2.1e-89 332.8 220 75.9
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 8.0e-89 330.9 218 75.7
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.0e-88 330.5 218 75.2
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.4e-88 330.1 244 70.1
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.4e-88 330.1 208 77.9
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.4e-88 330.1 223 72.2
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.1e-87 327.0 207 78.3
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.1e-87 327.0 208 77.4
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.5e-87 326.6 195 79.5
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.6e-87 325.9 208 76.9
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 4.4e-87 325.1 245 68.2
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 4.4e-87 325.1 210 75.7
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.7e-86 322.0 210 75.7
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.8e-86 321.6 183 86.9
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.3e-86 321.2 203 77.8
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.4e-85 319.3 206 76.7
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 3.1e-85 318.9 208 73.1
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 2.6e-84 315.8 209 72.7
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 5.9e-84 314.7 215 74.4
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.0e-83 313.9 223 71.7
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 2.2e-83 312.8 218 73.9
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 6.5e-83 311.2 204 74.5
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.5e-82 309.3 198 76.3
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 4.2e-82 308.5 195 78.5
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 7.2e-82 307.8 207 72.5
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.2e-81 307.0 218 72.0
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 3.6e-81 305.4 226 69.5
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 7.0e-77 291.2 214 69.6
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 4.5e-76 288.5 206 67.0
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 5.9e-76 288.1 196 75.0
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.5e-74 283.5 207 66.7
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 5.2e-72 275.0 208 70.2
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.4e-71 272.3 170 79.4
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 2.8e-70 269.2 207 65.2
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 3.7e-70 268.9 207 64.3
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 3.7e-70 268.9 173 78.6
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 7.0e-69 264.6 202 68.8
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 3.3e-66 255.8 230 61.3
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 3.6e-65 252.3 173 72.8
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 4.0e-64 248.8 225 60.4
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.0e-63 246.5 154 81.8
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 2.8e-57 226.1 145 75.2
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.5e-55 220.3 138 82.6
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 7.5e-55 218.0 137 81.0
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.6e-51 204.9 179 62.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 4.9e-46 188.7 113 83.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 9.2e-45 184.5 132 73.5
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.2e-44 184.1 120 77.5
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.6e-36 155.6 108 73.1
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 6.0e-36 155.2 115 69.6
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 3.0e-35 152.9 136 62.5
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 2.8e-33 146.4 96 67.7
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 1.4e-32 144.1 212 42.0
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 8.4e-30 134.8 204 36.8
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 6.6e-27 125.2 196 35.2
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 9.0e-24 114.8 101 64.4
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 1.2e-23 114.4 101 64.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 7.1e-21 105.1 81 67.9
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 2.3e-19 100.1 78 56.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 8.1e-17 91.7 111 49.5
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.0e-15 87.0 57 66.7


User provided reference genes

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